Factsheet for VIT_19s0015g01160.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039981_P001	Maize	cytosol	14.17	71.54
KRH62508	Soybean	cytosol	70.69	70.81
KRH56402	Soybean	cytosol	70.37	70.48
Zm00001d031251_P001	Maize	cytosol, mitochondrion	14.17	68.22
KRH07662	Soybean	cytosol	67.47	67.69
Solyc07g066090.2.1	Tomato	nucleus	66.67	66.77
PGSC0003DMT400057292	Potato	nucleus	65.86	66.18
KRH45371	Soybean	cytosol	46.86	66.14
AT1G55690.4	Thale cress	nucleus	65.38	64.96
HORVU1Hr1G088100.1	Barley	cytosol	16.59	63.98
CDY42378	Canola	nucleus	65.7	63.45
Solyc10g005740.1.1	Tomato	nucleus	62.96	63.27
CDY10540	Canola	cytosol, nucleus, plastid	65.22	62.99
Bra030841.1-P	Field mustard	nucleus	60.39	62.6
CDY50018	Canola	vacuole	63.61	61.82
HORVU7Hr1G037200.1	Barley	nucleus	20.93	60.75
Zm00001d012531_P001	Maize	mitochondrion	12.72	60.31
CDY51073	Canola	mitochondrion, nucleus	49.6	60.27
PGSC0003DMT400022405	Potato	cytosol, nucleus	56.2	59.97
HORVU3Hr1G112740.3	Barley	nucleus	21.09	58.48
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	21.09	58.48
GSMUA_Achr4P09770_001	Banana	cytosol	42.67	58.11
GSMUA_Achr7P06190_001	Banana	cytosol	53.78	57.89
Zm00001d043774_P001	Maize	cytosol	7.57	55.29
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	53.95	54.92
GSMUA_Achr3P04130_001	Banana	nucleus	54.75	54.57
KXG40069	Sorghum	nucleus	54.43	53.65
Os08t0341700-01	Rice	nucleus	54.27	52.9
TraesCS2B01G533900.1	Wheat	nucleus	53.62	52.86
GSMUA_Achr5P04200_001	Banana	plastid	52.82	52.48
TraesCS2D01G506400.1	Wheat	nucleus	53.3	52.29
Zm00001d014589_P001	Maize	cytosol	7.89	50.52
Os02t0721800-01	Rice	cytosol	49.28	50.0
TraesCS7D01G238000.2	Wheat	cytosol	48.63	49.92
KXG30865	Sorghum	cytosol	49.44	49.76
HORVU6Hr1G071770.19	Barley	cytosol	49.44	49.68
TraesCS6D01G265200.1	Wheat	cytosol	49.28	49.43
OQU80990	Sorghum	cytosol	48.31	49.42
TraesCS6A01G284800.1	Wheat	cytosol	49.28	49.35
Os08t0497300-01	Rice	cytosol, plastid	47.99	49.34
TraesCS6B01G313500.1	Wheat	cytosol	49.11	49.27
Zm00001d017876_P018	Maize	cytosol	48.95	49.27
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	51.85	48.79
EER96946	Sorghum	cytosol, nucleus, plastid	47.02	48.75
Zm00001d051674_P037	Maize	cytosol	47.99	48.69
VIT_07s0005g06640.t01	Wine grape	endoplasmic reticulum	47.5	48.28
Zm00001d005995_P003	Maize	nucleus	46.05	47.75
Os09t0481100-01	Rice	nucleus	46.54	47.3
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	22.54	47.14
VIT_03s0038g04470.t01	Wine grape	cytosol	47.02	46.72
Zm00001d050131_P002	Maize	cytosol	47.99	46.64
Zm00001d045670_P001	Maize	cytosol	14.01	46.28
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	14.65	45.96
VIT_18s0001g12950.t01	Wine grape	cytosol	46.05	45.91
Zm00001d031316_P020	Maize	cytosol	47.67	45.89
HORVU7Hr1G048880.11	Barley	mitochondrion	47.67	45.75
Zm00001d045718_P001	Maize	cytosol	18.52	45.45
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	48.79	45.16
TraesCS7B01G135600.2	Wheat	plastid	48.47	45.13
HORVU1Hr1G091860.1	Barley	cytosol	10.79	41.1
Zm00001d052840_P016	Maize	plastid	47.99	41.1
VIT_04s0023g02400.t01	Wine grape	cytosol, nucleus, plastid	34.78	40.3
VIT_03s0038g04480.t01	Wine grape	cytosol	39.61	39.68
Zm00001d010393_P001	Maize	plastid	22.38	38.19
Bra038012.1-P	Field mustard	cytosol	63.28	37.15
Zm00001d037983_P001	Maize	cytosol	14.01	36.86
VIT_02s0154g00510.t01	Wine grape	cytosol	22.54	36.36
Zm00001d047488_P001	Maize	nucleus	8.7	33.75
VIT_10s0116g00400.t01	Wine grape	cytosol	14.65	26.92
VIT_19s0015g00760.t01	Wine grape	cytosol	12.4	22.78
Zm00001d035370_P003	Maize	plastid	14.65	22.3
Zm00001d005778_P001	Maize	plastid	8.21	18.15

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100263435	wikigene:100263435	Gene3D:3.40.525.10	MapMan:35.1	ProteinID:CBI39799
ProteinID:CBI39799.3	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	UniProt:D7UAN4
EMBL:FN596747	InterPro:IPR001251	InterPro:IPR036865	EntrezGene:LOC100263435	wikigene:LOC100263435	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF84	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:TC56325	UniParc:UPI0001985833	ArrayExpress:VIT_19s0015g01160	EnsemblPlantsGene:VIT_19s0015g01160
EnsemblPlants:VIT_19s0015g01160.t01	unigene:Vvi.1487	RefSeq:XP_002268040	RefSeq:XP_002268040.1	SEG:seg	:

Description

No Description!

Coordinates

chr19:-:9245246..9251552

Molecular Weight (calculated)

71637.6 Da

IEP (calculated)

8.199

GRAVY (calculated)

-0.638

Length

621 amino acids

Sequence
(BLAST)

001: MSGLEEGLGA QDEIRERRSD LENSEDERRR SKIAHLKKKA INASNKFTHS LKKRGKRKID YRVPSVSIED VRDAKEESAV HELRQKLLDK DLLPPRHDDY
101: HTLLRFLKAR EFNIERTIQM WEEMLNWRKE YGTDTILEDF EFKELEDVLQ YYPQGYHGVD KEGRPVYIER LGKAHPSRLM RITTIDRYLK YHVQEFEKAL
201: LEKFPACSIA AKRRICSTTT ILDVQGLGMK NFTRTAANLV AAMAKIDNNY YPETLHRMFV VNAGPGFKKM LWPAAQKFLD PKTISKIQVL EPKFLCKLLE
301: VIDSSQLPDF LGGSCTCATD GGCLRSNKGP WNDPEIMKLV HNAESIFVRQ ITRIVNDQQK LDSYIQIRPL KGRGSDTMTV ESGSDVDDPC SPTGQRSSSF
401: PRLAPVHEEA RASDPNSYYS CDDHFGLVDE ATGYDQEVGH TQGQSLNDMG NSSSGKISNS GGIPVNRRSN TVKEKVENRN FQFLARMLIS FLVRLVAFIR
501: SFPFEFWRRQ SNIYPSNVME DNQNSCSGAD ETVYKEDPIL PCIQRLQSIE KKFEELRNKP AEIPFEKEQI LLESLDRIKS VEFDLEKTKR VLHATVMKEL
601: EIAELLENLR QSKFRRRRLF C

Best Arabidopsis Sequence Match ( AT1G55690.5 )
(BLAST)

001: MSGVEEISTL DEFRERRSDF EISEDERRRS KIGNLKKKAI NASTKFTHSL KKRGKRKIDY RVPAVSIEDV RDEKEESVVL EFRRKLLERD LLPPRHDEYH
101: TLLRFLKARD LNIEKTTQLW EEMLRWRKEY GTDTILEDFD FEELEEVLQY YPQGYHGVDK EGRPVYIERL GKAHPSKLMR ITTIDRYLKY HVQEFERALQ
201: EKFPACSIAA KRRICSTTTI LDVQGLGIKN FTPTAANLVA AMSKIDNSYY PETLHRMYIV NAGTGFKKML WPAAQKFLDA KTIAKIHVLE PKSLFKLHEV
301: IDSSQLPEFL GGSCSCFGDG GGCLRSNKGP WNDPEIMKLI YHGESSLFRQ STRKLTDPHY SSSYISIHPS KAIQAETSAA ESISCSDVPS SPTGRLCSAS
401: SHVNSAYEEA RASDVNGYYS CDDKFAIPDK ATNRKGQERQ SQYQMRELNA TTIGLKCETS SPGAPIIRWL HDLRVMIDKI KCENLAKRLL SLMLKLAAVF
501: RYTPLELLRS QTTVSPSSLT EDDSRCSLIS PPPREPTMKD RILPCLERIQ KLEKSYEDIR NKPVAIPVEK ERMLMDSLDR IKSVEFDLDK TKRLLHATVM
601: KQMEITEMLQ NIRDSQLHRR RRLFC

Arabidopsis Description

SFH13Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Source:UniProtKB/Swiss-Prot;Acc:Q501H5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.