Factsheet for VIT_03s0038g04470.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29416	Soybean	cytosol	83.36	82.83
KRH24438	Soybean	cytosol	83.2	82.67
KRH60804	Soybean	cytosol	80.0	80.13
GSMUA_Achr3P28830_001	Banana	nucleus	33.76	79.62
Solyc01g109870.2.1	Tomato	cytosol	78.08	78.08
Bra030295.1-P	Field mustard	cytosol	35.2	77.74
PGSC0003DMT400001942	Potato	cytosol	77.6	77.6
CDY15888	Canola	cytosol	35.04	77.39
CDX99587	Canola	cytosol, mitochondrion	34.72	76.68
VIT_18s0001g12950.t01	Wine grape	cytosol	76.32	76.56
CDX82040	Canola	cytosol	73.76	76.45
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	75.04	76.38
Solyc10g053970.1.1	Tomato	cytosol	76.0	76.24
CDY13810	Canola	cytosol	76.64	75.79
KRH51499	Soybean	cytosol	77.44	75.51
GSMUA_Achr1P12050_001	Banana	cytosol	75.04	74.92
PGSC0003DMT400043545	Potato	cytosol	76.96	74.81
Bra031196.1-P	Field mustard	cytosol	75.2	74.37
AT2G21520.3	Thale cress	cytosol	75.36	73.94
CDY12125	Canola	cytosol	72.8	73.86
Bra010700.1-P	Field mustard	cytosol	72.8	73.62
GSMUA_Achr2P09690_001	Banana	cytosol	73.6	73.48
CDX90316	Canola	cytosol	72.64	73.46
GSMUA_Achr9P22020_001	Banana	cytosol	72.0	71.32
KXG29407	Sorghum	cytosol, nucleus, plastid	68.0	67.89
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	67.2	66.67
GSMUA_Achr10P...	Banana	cytosol	59.36	66.49
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	66.72	66.19
Zm00001d015174_P005	Maize	cytosol	67.84	64.83
Os02t0133100-01	Rice	cytosol	43.52	64.3
Zm00001d053994_P008	Maize	cytosol, mitochondrion	67.68	63.51
GSMUA_Achr3P28840_001	Banana	mitochondrion	36.8	62.5
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	64.16	61.6
Os05t0545000-01	Rice	cytosol, nucleus, plastid	59.36	60.52
Zm00001d038880_P001	Maize	cytosol	59.04	59.71
KXG22454	Sorghum	cytosol	58.88	59.45
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	58.72	59.1
Zm00001d009439_P004	Maize	cytosol	58.4	59.06
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	66.72	55.97
GSMUA_Achr1P25320_001	Banana	cytosol	57.76	55.2
VIT_03s0038g04480.t01	Wine grape	cytosol	54.08	54.52
KXG33199	Sorghum	cytosol	52.0	53.72
VIT_04s0023g02400.t01	Wine grape	cytosol, nucleus, plastid	45.76	53.36
TraesCS3D01G255900.4	Wheat	cytosol	52.0	52.85
Zm00001d011663_P003	Maize	cytosol	51.2	52.12
TraesCS3B01G287000.6	Wheat	cytosol	52.8	51.72
TraesCS3A01G255000.6	Wheat	cytosol	52.48	51.41
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	58.24	51.12
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	58.4	51.12
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	58.24	49.93
Zm00001d043733_P002	Maize	mitochondrion	43.84	49.91
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	52.8	49.33
Os01t0701900-01	Rice	nucleus	50.56	47.09
VIT_19s0015g01160.t01	Wine grape	cytosol	46.72	47.02
VIT_07s0005g06640.t01	Wine grape	endoplasmic reticulum	43.2	44.19
VIT_02s0154g00510.t01	Wine grape	cytosol	25.12	40.78
VIT_10s0116g00400.t01	Wine grape	cytosol	15.2	28.11
VIT_19s0015g00760.t01	Wine grape	cytosol	14.24	26.33

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100252199	wikigene:100252199	Gene3D:3.40.525.10	MapMan:35.1	ProteinID:CBI37683
ProteinID:CBI37683.3	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil
UniProt:D7U4L4	EMBL:FN596508	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001251
InterPro:IPR036865	EntrezGene:LOC100252199	wikigene:LOC100252199	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF145	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	TIGR:TC63725	TMHMM:TMhelix	UniParc:UPI00015C8FB8	ArrayExpress:VIT_03s0038g04470	EnsemblPlantsGene:VIT_03s0038g04470
EnsemblPlants:VIT_03s0038g04470.t01	RefSeq:XP_002283681	RefSeq:XP_002283681.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:+:3260739..3269643

Molecular Weight (calculated)

71049.2 Da

IEP (calculated)

8.297

GRAVY (calculated)

-0.536

Length

625 amino acids

Sequence
(BLAST)

001: MSGPLDRFAR PCFEGFSGHD ERRERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSSRRKSDGR VSSVSIEDVR DVEELEAVDA FRQALILDEL
101: LPTKHDDYHM MLRFLKARKF DIEKAKHMWT DMIQWRKDFG ADTILEDFEF KELNEVLKYY PHGHHGVDKE GRPVYIERLG KVDPYKLMQV TTMDRYVKYH
201: VQEFEKSFAL KFPACTIAAK RHIDSSTTIL DVQGVGFKNL TKAARDLIMR LQKIDGDNYP ETLCQMFIIN AGPGFRLLWN TVKTFLDPKT TSKIHVLGNK
301: YQNKLLEIID ASELPEFLGG TCTCADQGGC LRSDKGPWNN PDILKMMHNG DARRARQVVK VLNSEGKVIA YAKPQYPMMK GSDTSTAESG SEAEDIASPK
401: MTKSYSQLRL TPVREEAKVV GKVSYAGSFG GYDEYVPMVD KAVDAGWKKQ AALQRPSSSK GTLPLLDTQK SPEGIHTRIL SALLAFFMTL FTLFCTVALR
501: VTNKLPDRVD HDENIPQLAP DATHKEDFRP PSPIPAFTEA DLLSSVLKKL SELEEKVDTL QAKPSEMPYE KEELLNAAVC RVDALEAELI ATKKALHEAL
601: LRQEELLAYI DSQEEAKFRK KKFCW

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.