Factsheet for TraesCS1A01G366700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol, golgi, plasma membrane, vacuole, endoplasmic reticulum, mitochondrion, plastid

Predictor Summary:

mitochondrion 3
nucleus 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	85.25	97.75
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	95.37	95.1
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	89.19	87.11
Os05t0545000-01	Rice	cytosol, nucleus, plastid	72.47	84.18
KXG22454	Sorghum	cytosol	70.22	80.78
Zm00001d009439_P004	Maize	cytosol	69.1	79.61
Zm00001d038880_P001	Maize	cytosol	68.68	79.13
GSMUA_Achr3P28830_001	Banana	nucleus	26.26	70.57
TraesCS3A01G255000.6	Wheat	cytosol	58.71	65.52
CDY15888	Canola	cytosol	25.7	64.66
Bra030295.1-P	Field mustard	cytosol	25.7	64.66
CDX99587	Canola	cytosol, mitochondrion	25.28	63.6
GSMUA_Achr9P22020_001	Banana	cytosol	56.04	63.23
KRH29416	Soybean	cytosol	51.83	58.66
KRH24438	Soybean	cytosol	51.54	58.35
VIT_03s0038g04470.t01	Wine grape	cytosol	51.12	58.24
KRH60804	Soybean	cytosol	50.98	58.17
GSMUA_Achr3P28840_001	Banana	mitochondrion	30.06	58.15
Solyc01g109870.2.1	Tomato	cytosol	50.14	57.12
PGSC0003DMT400001942	Potato	cytosol	50.0	56.96
CDX82040	Canola	cytosol	47.61	56.22
AT2G21520.3	Thale cress	cytosol	50.28	56.2
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	49.72	56.19
CDY13810	Canola	cytosol	49.86	56.17
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	48.17	55.86
CDY12125	Canola	cytosol	48.31	55.84
Bra010700.1-P	Field mustard	cytosol	48.46	55.83
CDX90316	Canola	cytosol	48.31	55.66
KRH51499	Soybean	cytosol	49.72	55.23
Bra031196.1-P	Field mustard	cytosol	48.74	54.91
Solyc10g053970.1.1	Tomato	cytosol	47.89	54.74
PGSC0003DMT400043545	Potato	cytosol	48.46	53.65
GSMUA_Achr1P25320_001	Banana	cytosol	45.22	49.24
TraesCS2A01G327200.2	Wheat	nucleus	37.92	45.69
TraesCS6A01G097200.1	Wheat	plastid	37.22	43.23
TraesCS6A01G284800.1	Wheat	cytosol	37.64	43.23
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	37.08	39.34
TraesCS2A01G499900.1	Wheat	mitochondrion	21.21	38.42
TraesCS6A01G164200.1	Wheat	cytosol	11.52	25.08
TraesCS7A01G378400.1	Wheat	cytosol	11.38	24.92
TraesCS5A01G170000.1	Wheat	cytosol	11.66	24.78

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765
PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF72	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G366700	EnsemblPlants:TraesCS1A01G366700.1	TIGR:cd00170
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:545521478..545527577

Molecular Weight (calculated)

80289.8 Da

IEP (calculated)

9.145

GRAVY (calculated)

-0.622

Length

712 amino acids

Sequence
(BLAST)

001: MGRVYPRRDG NPRAAALWLL LPAGVARPIK TVGEGEASPP PPPAPKSAPK IRILAVKNRR REPNSPIVRL ARASDSGPGA SLGRSSPEPE GMSGPLDRLA
101: RPSFEGFTHN DGKKESRSDA DNSEGEKKTK IASFKKKAIN AGNKFRHSLR RRSKKKNENQ ISIEDIRDVQ DLQAVEAFRQ CLHDEDLLPQ QHDDYHMMLR
201: FLKARKFDVE KAKLMWSDML TWRKEFGTDN IEEFDYAELN EVMKYYPQFY HGVDKDGRPI YVELIGKVDA NKVLQVTTID RYVKYHVKEF EKCFQMRFPA
301: CSIAAKRHLD SCTTILDVQG VGLKNFSKCA RELITRLQKI DSDNYPETLC RMYIINAGQG FKMLWGTIKS FLDPKTASKI HVLGTKYQNK LLEIIDESEL
401: PEFFGGKCKC EEHGGCQRSD KGPWKDPTTI KRVLNGEANY DRQIVTISGT DGKIIGYARP QRPNQGKGSD ASAESGSEVE DVTSPTAPKT LITNPSLTPV
501: HEESKFAAHA STSAAHPTIE DSIPVVDKVV DDGWSSPRAS PVSSSSGSLS LRNLPTTFKG IRTLAVAWLT VFIVTLFAML RSIPSRMAKR LSNQSNDHDH
601: YYVDCPQEQE YKEEFRPPSP APAYTEKDIL STLVRRLGEL EEKVQALEKK PSEMPFEKEE LLNASARRVD ALEADLISTK KALYEALMRQ DELLAFIDKQ
701: DMLKFRKKKF CF

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.