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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82040 Canola cytosol 85.56 90.38
CDY13810 Canola cytosol 89.33 90.03
Bra030295.1-P Field mustard cytosol 39.72 89.4
CDY15888 Canola cytosol 39.72 89.4
Bra031196.1-P Field mustard cytosol 88.54 89.24
CDX99587 Canola cytosol, mitochondrion 38.93 87.63
AT4G39170.1 Thale cress cytosol, nucleus, plastid 81.0 84.04
GSMUA_Achr3P28830_001 Banana nucleus 32.81 78.87
VIT_03s0038g04470.t01 Wine grape cytosol 73.94 75.36
KRH29416 Soybean cytosol 73.94 74.88
KRH24438 Soybean cytosol 73.47 74.4
KRH60804 Soybean cytosol 72.68 74.2
PGSC0003DMT400001942 Potato cytosol 71.11 72.48
Solyc01g109870.2.1 Tomato cytosol 70.96 72.32
Solyc10g053970.1.1 Tomato cytosol 70.02 71.59
KRH51499 Soybean cytosol 69.86 69.42
PGSC0003DMT400043545 Potato cytosol 69.7 69.05
GSMUA_Achr1P12050_001 Banana cytosol 67.66 68.85
GSMUA_Achr2P09690_001 Banana cytosol 67.03 68.21
GSMUA_Achr9P22020_001 Banana cytosol 65.78 66.4
KXG29407 Sorghum cytosol, nucleus, plastid 63.42 64.54
GSMUA_Achr10P... Banana cytosol 55.26 63.08
TraesCS6A01G097100.2 Wheat cytosol, nucleus, plastid 62.32 63.02
TraesCS6B01G125600.1 Wheat cytosol, nucleus, plastid 62.17 62.86
Zm00001d015174_P005 Maize cytosol 63.74 62.08
Zm00001d053994_P008 Maize cytosol, mitochondrion 63.74 60.96
Os02t0133100-01 Rice cytosol 39.87 60.05
Os05t0545000-01 Rice cytosol, nucleus, plastid 57.77 60.03
Zm00001d038880_P001 Maize cytosol 56.51 58.25
TraesCS6D01G085300.6 Wheat cytosol, nucleus, plastid 59.5 58.22
KXG22454 Sorghum cytosol 56.36 58.0
TraesCS1B01G384500.1 Wheat cytosol, nucleus, plastid 56.51 57.97
AT1G19650.1 Thale cress cytosol 54.95 57.57
Zm00001d009439_P004 Maize cytosol 55.57 57.28
GSMUA_Achr3P28840_001 Banana mitochondrion 32.18 55.71
AT4G36490.1 Thale cress plastid 46.31 54.33
AT2G21540.2 Thale cress cytosol, nucleus, vacuole 46.47 54.01
AT4G34580.2 Thale cress cytosol 46.94 53.97
KXG33199 Sorghum cytosol 50.71 53.39
HORVU6Hr1G017570.5 Barley cytosol, nucleus, plastid 62.32 53.29
AT1G75370.2 Thale cress cytosol 55.1 52.54
AT4G39180.1 Thale cress cytosol 45.53 52.35
AT2G18180.1 Thale cress plastid 45.37 51.79
GSMUA_Achr1P25320_001 Banana cytosol 53.06 51.68
TraesCS3D01G255900.4 Wheat cytosol 49.61 51.38
Zm00001d011663_P003 Maize cytosol 48.98 50.81
TraesCS3B01G287000.6 Wheat cytosol 50.71 50.63
TraesCS1A01G366700.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 56.2 50.28
TraesCS1D01G372200.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 56.36 50.28
TraesCS3A01G255000.6 Wheat cytosol 50.24 50.16
AT2G16380.1 Thale cress cytosol 42.39 49.36
HORVU1Hr1G078880.9 Barley cytosol, nucleus 55.89 48.83
Zm00001d043733_P002 Maize mitochondrion 41.6 48.27
HORVU3Hr1G065830.17 Barley cytosol, mitochondrion, plastid 50.08 47.68
Os01t0701900-01 Rice nucleus 48.67 46.2
AT3G24840.3 Thale cress cytosol 38.3 42.07
AT5G47510.4 Thale cress cytosol 24.65 41.64
AT1G55690.4 Thale cress nucleus 40.66 41.44
AT5G56160.1 Thale cress cytosol 35.16 38.82
AT1G55840.1 Thale cress cytosol 13.81 27.08
AT5G47730.1 Thale cress cytosol 13.19 24.63
Protein Annotations
Gene3D:1.10.8.20Gene3D:3.40.525.10MapMan:35.1EntrezGene:816691ProteinID:AEC07190.1ProteinID:ANM61322.1
ArrayExpress:AT2G21520EnsemblPlantsGene:AT2G21520RefSeq:AT2G21520TAIR:AT2G21520RefSeq:AT2G21520-TAIR-GEnsemblPlants:AT2G21520.3
Unigene:At.43802UniProt:B3H588InterPro:CRAL-TRIO_domInterPro:CRAL-TRIO_dom_sfInterPro:CRAL/TRIO_N_domInterPro:CRAL/TRIO_N_dom_sf
InterPro:IPR001251InterPro:IPR036865RefSeq:NP_001118356.1RefSeq:NP_001323547.1PFAM:PF00650PFAM:PF03765
PRINTS:PR00180PFscan:PS50191PANTHER:PTHR23324PANTHER:PTHR23324:SF145SMART:SM00516SMART:SM01100
SUPFAM:SSF46938SUPFAM:SSF52087UniParc:UPI0001739182SEG:seg::
Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
Coordinates
chr2:+:9215636..9219236
Molecular Weight (calculated)
72119.8 Da
IEP (calculated)
8.924
GRAVY (calculated)
-0.491
Length
637 amino acids
Sequence
(BLAST)
001: MSGPLDRFAR PSFTTGFEGF LSSDEKKERK SDFENSEDER RTRIGSLKKK AINASTKFKH SLKKKSGRRK SDGRVSSVSI EDVRDVEELQ AVDAFRQSLL
101: MDELLPDRHD DYHMMLRFLK ARKFDVEKAK QMWADMIQWR KEFGTDTIIQ DFDFEEINEV LKHYPQCYHG VDKEGRPIYI ERLGKVDPNR LMQVTSMDRY
201: VRYHVKEFER SFMIKFPSCT ISAKRHIDSS TTILDVQGVG LKNFNKSARD LITRLQKIDG DNYPETLHQM FIINAGPGFR LLWNTVKSFL DPKTSAKIHV
301: LGYKYLSKLL EVIDVNELPE FLGGACTCAD QGGCMLSDKG PWKNPEIVKM VLHGGAHRAR QVVKVLNSEG KVIAYAKPSY TWIKGSDTST AESGSDAEDI
401: GSPKAIKSFS HLRLTPVREE AKIAGETSLA GSFPGYDEYV PMVDKAVDAT WKVKPAIQRV ASRGALMSPT VPKDHEGIKA RVLVMFMAFL MAVFTFFRTV
501: TKKLPATTTS SPAETQGNAI ELGSNGEGVK EECRPPSPVP DLTETDLLNC VTKKLTELEG KIGTLQSKPN EMPYEKEELL NAAVCRVDAL EAELIATKKA
601: LYEALMRQEE LLAYIDRQEE AQFQKMKKKK KKHLFCF
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.