Factsheet for Os01t0701900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33199	Sorghum	cytosol	63.19	70.08
TraesCS3D01G255900.4	Wheat	cytosol	61.7	67.32
TraesCS3B01G287000.6	Wheat	cytosol	62.74	65.99
Zm00001d011663_P003	Maize	cytosol	60.36	65.96
Os05t0545000-01	Rice	cytosol, nucleus, plastid	59.76	65.42
TraesCS3A01G255000.6	Wheat	cytosol	62.15	65.36
GSMUA_Achr3P28830_001	Banana	nucleus	25.78	65.28
Zm00001d043733_P002	Maize	mitochondrion	52.31	63.93
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	63.04	63.23
Bra030295.1-P	Field mustard	cytosol	25.78	61.13
CDY15888	Canola	cytosol	25.78	61.13
CDX99587	Canola	cytosol, mitochondrion	25.34	60.07
GSMUA_Achr9P22020_001	Banana	cytosol	52.46	55.78
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	47.69	52.12
CDY12125	Canola	cytosol	47.84	52.11
Bra010700.1-P	Field mustard	cytosol	47.54	51.62
CDX90316	Canola	cytosol	47.39	51.46
KRH60804	Soybean	cytosol	47.69	51.28
Solyc01g109870.2.1	Tomato	cytosol	47.54	51.04
KRH29416	Soybean	cytosol	47.84	51.03
CDX82040	Canola	cytosol	45.6	50.75
PGSC0003DMT400001942	Potato	cytosol	47.24	50.72
KRH24438	Soybean	cytosol	47.54	50.72
VIT_03s0038g04470.t01	Wine grape	cytosol	47.09	50.56
Solyc10g053970.1.1	Tomato	cytosol	46.8	50.4
KRH51499	Soybean	cytosol	47.84	50.08
CDY13810	Canola	cytosol	46.5	49.37
Bra031196.1-P	Field mustard	cytosol	46.35	49.21
PGSC0003DMT400043545	Potato	cytosol	46.94	48.99
Os02t0133100-01	Rice	cytosol	30.85	48.94
GSMUA_Achr3P28840_001	Banana	mitochondrion	26.83	48.91
AT2G21520.3	Thale cress	cytosol	46.2	48.67
GSMUA_Achr1P25320_001	Banana	cytosol	45.6	46.79
Os07t0456500-01	Rice	cytosol	15.65	44.3
Os10t0122600-01	Rice	cytosol, nucleus, plastid	38.9	43.65
Os02t0440900-00	Rice	cytosol	38.75	43.48
Os02t0133200-01	Rice	plasma membrane	38.15	40.51
Os08t0341700-01	Rice	nucleus	38.3	40.35
Os08t0497300-01	Rice	cytosol, plastid	35.77	39.74
Os09t0481100-01	Rice	nucleus	36.07	39.61
Os02t0721800-01	Rice	cytosol	35.92	39.38
Os09t0258000-01	Rice	cytosol	12.67	25.37
Os02t0200000-01	Rice	cytosol	11.62	23.85
Os06t0607200-01	Rice	cytosol	3.87	17.93

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	ProteinID:BAD81782.1	ProteinID:BAD82224.1	ProteinID:BAF05905.1
ProteinID:BAS73899.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001251	InterPro:IPR036865	EnsemblPlantsGene:Os01g0701900
EnsemblPlants:Os01t0701900-01	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF69
UniProt:Q5N8J4	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix
UniParc:UPI000049E899	SEG:seg	:	:	:	:

Description

SPO20 homolog, Sec14-nodulin domain protein 5, Sec14-nodulin domain-containing protein 5Similar to Phosphatidylinositol transfer-like protein III. (Os01t0701900-01)

Coordinates

chr1:-:29067275..29072196

Molecular Weight (calculated)

75916.2 Da

IEP (calculated)

9.218

GRAVY (calculated)

-0.556

Length

671 amino acids

Sequence
(BLAST)

001: MKRKQKLLFP SPPKQKHQNI PPKSKEKQSI SNEPSLSILV PLLSPRIPPP ETLVHRRAAR LGDSITLRGI EVGPRVGKAK MAGSIDRPSG AGFEGIVHDD
101: DKKEWKSDED NSEGDKKAKA VSFKNRAISA GNKFRRSLRR KRRRRVGDHV ASIEDIRDVK ELEAVQRFHQ CLHDEGLLPE RHDDYHVMLR FLKARKFDID
201: KAKHMWSEML RWRKEFGADN IEEFDYSELD DVLECYPQFY HGVDKEGRPV YIELIGKVDP NKLVQVTTID RYVKYHVKES EKCLQMRFPA CSIAAKRHID
301: SCSTILDVQG VGLKNFSKDA RELIMRLQKI NNDNYPETLH RLYIINAGQG FKMLWGTIKS FLDPQTASKI HVLGSKYQNK LLETIDESEL PDFLGGKCRC
401: EEHGGCIKSD KGPWKDPDII KRVLNGEANY GRKILAISSV DGKKICYINP RHLTKKCSDA SAESSSEMED VSSPIASVNP IINPHLTPVD ESKLPGNTST
501: SGAPPRVEDI PVVDKAVDTC AGPSTSSMAF NSDSFSLRNI TMELGGLRNR ITAWLIVLIV SFVAVLRSVP SRVTASLSSQ AISRENSTHS SVLRRLGELE
601: EKLQELEAKQ SQMPPDREEL LNGAIHRVDA LEAELISTKK MLYDALMRLD ELLAYADQQK NIQFRKKRFC F

Best Arabidopsis Sequence Match ( AT4G39170.1 )
(BLAST)

001: MSGPVDRFAI PCFEGILSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KRRKSDVRVS SVSIEDVRDV EELQAVDEFR QALVMEELLP
101: HKHDDYHMML RFLKARKFDI EKAKHMWADM IQWRKEFGTD TIIQDFQFEE IDEVLKYYPH GYHSVDKEGR PVYIERLGKV DPNKLMQVTT LDRYIRYHVK
201: EFERSFMLKF PACTIAAKKY IDSSTTILDV QGVGLKNFTK SARELITRLQ KIDGDNYPET LHQMFIINAG PGFRLLWSTV KSFLDPKTTS KIHVLGCKYQ
301: SKLLEIIDSS ELPEFLGGAC TCADQGGCML SDKGPWKNPE IVKMVLHGGA HRAKQVVKVL NSDGKVIAYA KPSYPWIKGS DTSTAESGSE AEDIVVSPKA
401: VKSYSHLRLT PVREEAKVGS GETSFAGSFA GYDEYVPMVD KAVDATWKVK PTAINRAPSK GAHMPPNVPK DHESFSARVL VTFMAFVMAI LTFFRTVSNR
501: VVTKQLPPPP SQPQIEGSAA AEEADLLNSV LKKLTELEEK IGALQSKPSE MPYEKEELLN AAVCRVDALE AELIATKKAL YEALMRQEEL LAYIDRQEAA
601: QHQKKNKRKQ MFCF

Arabidopsis Description

SFH6Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 [Source:UniProtKB/Swiss-Prot;Acc:F4JVA6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.