Factsheet for Os09t0258000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G174400.1	Wheat	cytosol	85.67	85.67
TraesCS5A01G170000.1	Wheat	cytosol	85.67	85.67
TraesCS5B01G166800.1	Wheat	cytosol	85.37	85.37
HORVU5Hr1G052230.2	Barley	cytosol	84.48	84.23
EER96447	Sorghum	cytosol	83.28	83.28
CDY52903	Canola	cytosol	64.18	65.75
Zm00001d005118_P002	Maize	cytosol	77.31	65.74
Bra038021.1-P	Field mustard	cytosol	63.88	65.44
CDY53762	Canola	cytosol	63.88	65.44
Os02t0200000-01	Rice	cytosol	63.58	65.14
AT1G55840.1	Thale cress	cytosol	62.69	64.62
CDY10527	Canola	cytosol	62.69	64.62
CDY42389	Canola	cytosol	62.69	64.62
Bra030831.1-P	Field mustard	cytosol	62.39	64.31
Os06t0607200-01	Rice	cytosol	21.49	49.66
Os07t0456500-01	Rice	cytosol	12.84	18.14
Os02t0721800-01	Rice	cytosol	29.25	16.01
Os10t0122600-01	Rice	cytosol, nucleus, plastid	27.16	15.22
Os08t0341700-01	Rice	nucleus	28.36	14.91
Os08t0497300-01	Rice	cytosol, plastid	26.87	14.9
Os02t0440900-00	Rice	cytosol	26.57	14.88
Os05t0545000-01	Rice	cytosol, nucleus, plastid	26.57	14.52
Os09t0481100-01	Rice	nucleus	25.97	14.24
Os02t0133200-01	Rice	plasma membrane	25.97	13.77
Os02t0133100-01	Rice	cytosol	16.12	12.77
Os01t0701900-01	Rice	nucleus	25.37	12.67

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:4346537	EMBL:AK061499	EMBL:AK104755	ProteinID:BAD23434.1
ProteinID:BAF24613.1	ProteinID:BAT07091.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf
InterPro:IPR001251	InterPro:IPR036865	EnsemblPlantsGene:Os09g0258000	EnsemblPlants:Os09t0258000-01	PFAM:PF00650	PFAM:PF03765
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF142	UniProt:Q6K407	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00003B064B	RefSeq:XP_015612037.1	SEG:seg	:

Description

Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein. (Os09t0258000-01);Similar to predicted protein. (Os09t0258000-02)

Coordinates

chr9:-:4349684..4355176

Molecular Weight (calculated)

37960.8 Da

IEP (calculated)

7.924

GRAVY (calculated)

-0.331

Length

335 amino acids

Sequence
(BLAST)

001: MAAASEEAIK QFSALMELLD EPLKTTFQHV HQGYARGTLV RFLKAREWNV PKAHKMLMDC LNWRIQNGID SVLAKPIVPS DLYRTIRDTL LVGLTGYSKQ
101: GQPVYAFGVG LSTLDKASVH YYVQSHIQMN EYRDRVVLPK ASKMFGKQIN TCLKVMDMTG LKLSALNQIK MLSTITAIDD LNYPEKTETY FIVNAPYVFS
201: ACWKVVKPLL QERTKRKIKV LYGSGRDELL KVMDYEALPN FCKREGSGSS NDSSDGVDCY SYDHPFHQEL YNYIKQQALN EDFIGPIKQG SMHVDVPTPD
301: LEEAKIMETI ESELHKFSGA NGLSHSFNKI KIEGP

Best Arabidopsis Sequence Match ( AT1G55840.1 )
(BLAST)

001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI

Arabidopsis Description

At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.