Factsheet for Os10t0122600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36490.1	Os03t0596900-01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0440900-00	Rice	cytosol	93.65	93.65
TraesCS2B01G354800.2	Wheat	nucleus	81.27	82.23
TraesCS2A01G327200.2	Wheat	nucleus	80.94	81.9
TraesCS2D01G335700.2	Wheat	nucleus	80.94	81.9
HORVU2Hr1G082530.1	Barley	cytosol	79.26	81.87
Zm00001d016601_P006	Maize	cytosol	80.6	79.67
OQU85018	Sorghum	nucleus	81.44	79.45
GSMUA_Achr5P23630_001	Banana	cytosol	64.88	64.45
GSMUA_Achr6P03210_001	Banana	cytosol	62.54	62.96
KRH28724	Soybean	plastid	47.99	59.42
KRH76738	Soybean	plastid	47.49	59.04
KRH24439	Soybean	plastid	31.44	57.32
AT2G21540.2	Thale cress	cytosol, nucleus, vacuole	52.51	57.3
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	63.21	57.27
AT4G36490.1	Thale cress	plastid	51.51	56.72
CDX75444	Canola	cytosol	50.33	56.37
CDY15887	Canola	cytosol	51.51	56.1
PGSC0003DMT400043532	Potato	cytosol	52.17	56.01
CDX99586	Canola	cytosol	51.51	56.0
CDX69071	Canola	cytosol	50.0	55.99
KRH08168	Soybean	plastid	51.51	55.5
KRH69861	Soybean	plastid	51.51	55.5
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	45.15	55.33
CDY12126	Canola	cytosol	49.5	55.33
CDX90317	Canola	cytosol	49.67	55.31
Bra010699.1-P	Field mustard	cytosol	49.5	55.12
AT4G34580.2	Thale cress	cytosol	51.0	55.05
Bra034638.1-P	Field mustard	cytosol	50.0	54.96
Solyc10g053900.1.1	Tomato	cytosol, plastid	52.17	54.83
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	52.34	54.53
AT4G39180.1	Thale cress	cytosol	50.5	54.51
KRH51503	Soybean	cytosol	52.17	54.45
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	52.17	54.36
CDX89709	Canola	cytosol, mitochondrion	41.3	54.29
Os02t0133200-01	Rice	plasma membrane	57.36	54.27
Bra011544.1-P	Field mustard	cytosol, plastid	44.48	53.74
KRH29420	Soybean	cytosol, nucleus, plastid	50.5	53.64
KRH60806	Soybean	cytosol	51.17	53.5
AT2G18180.1	Thale cress	plastid	49.83	53.41
CDY17469	Canola	cytosol	50.5	52.89
Solyc11g040280.1.1	Tomato	cytosol	52.84	52.84
PGSC0003DMT400021690	Potato	nucleus	53.34	52.81
CDY45318	Canola	cytosol, plastid	44.15	52.8
VIT_03s0038g04480.t01	Wine grape	cytosol	53.68	51.77
Bra017663.1-P	Field mustard	cytosol, plastid	39.46	51.75
CDX76291	Canola	cytosol	50.5	51.01
VIT_04s0023g02400.t01	Wine grape	cytosol, nucleus, plastid	45.65	50.93
AT2G16380.1	Thale cress	cytosol	46.15	50.46
Os05t0545000-01	Rice	cytosol, nucleus, plastid	47.99	46.82
CDX69225	Canola	mitochondrion	46.32	45.63
Os02t0133100-01	Rice	cytosol	31.61	44.68
Os07t0456500-01	Rice	cytosol	16.56	41.77
Os08t0341700-01	Rice	nucleus	43.48	40.82
Os02t0721800-01	Rice	cytosol	41.47	40.52
Os08t0497300-01	Rice	cytosol, plastid	39.8	39.4
Os01t0701900-01	Rice	nucleus	43.65	38.9
Os09t0481100-01	Rice	nucleus	39.46	38.63
Os09t0258000-01	Rice	cytosol	15.22	27.16
Os02t0200000-01	Rice	cytosol	13.21	24.16
Os06t0607200-01	Rice	cytosol	4.85	20.0
CDY02262	Canola	cytosol, plastid	47.49	19.71
Bra013077.1-P	Field mustard	cytosol, plastid	47.49	19.47

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:4348005	ProteinID:BAF25982.2	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0007275	GO:GO:0008150
GO:GO:0009653	GO:GO:0009987	GO:GO:0016049	GO:GO:0030154	GO:GO:0040007	GO:GO:0048767
InterPro:IPR001251	InterPro:IPR036865	EnsemblPlantsGene:Os10g0122600	EnsemblPlants:Os10t0122600-01	PFAM:PF00650	PFAM:PF03765
PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF137	UniProt:Q0IZ83	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0001B66507	RefSeq:XP_015613004.1	SEG:seg

Description

Sec14-nodulin domain-containing protein 1Sec14 and nodulin domain-containing protein, Root hair elongation (Os10t0122600-01)

Coordinates

chr10:-:1447351..1451372

Molecular Weight (calculated)

67604.0 Da

IEP (calculated)

8.396

GRAVY (calculated)

-0.484

Length

598 amino acids

Sequence
(BLAST)

001: MTEVLSRPLE HRLSSATLDG HYEEKRKSNV EYSEDEKKAK IMSLKKKAMS SSQKLRHSMK KGRRSSKVMS ISIADERDPE EVQAVDAFRQ LLILEELLPS
101: QHDDYHMMLR FLKARKFDVE KAKQMWADML RWRKEFGADT ILEDFEFEEA GKVAECYPQG YHGVDKEGRP VYIERLGQID VNRLMQVTTM DRFIKNHVRE
201: FEKNFAVKFP ACSIATKCHI DQSTTILDVQ GVGMKQFSKA ARDLIGQLQK IDGDNYPETL CRMFIINAGP GFRLLWSTVK SFLDPKTTAK IHVLGNKYQS
301: KLLEVIDASE LPEFFGGTCQ CEGGCMKADK GPWKDDEVMK MVQSGVGWCG NLNLNHLEAE EKMMICEDDT MYTKKQESFK DEGRTLSRKI SRARIEHPTL
401: SPVCEELPPM MLPTPGSPYS CDVPMVEKAI DAICQSKGSR DENVAITKAI VNASNGSNPP LFGGVMALVM SIATMLRVSR NMPKKVLGAT LGAQSTSKIQ
501: AQQLSKISME AVSAAEYASS TKRLSDIEEK VIAILTKPAE MPADKEEMLK TAVSRVSALE EELAATKKAL QETLERQEEI MAYIEKKKKK KSKRLFRW

Best Arabidopsis Sequence Match ( AT2G21540.6 )
(BLAST)

001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF

Arabidopsis Description

SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [cytosol,nucleus,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.