Factsheet for Bra034638.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17469	Canola	cytosol	99.63	94.92
CDX76291	Canola	cytosol	99.63	91.55
AT4G34580.2	Thale cress	cytosol	93.01	91.34
Bra011544.1-P	Field mustard	cytosol, plastid	81.07	89.09
Bra017663.1-P	Field mustard	cytosol, plastid	71.14	84.87
Bra030295.1-P	Field mustard	cytosol	33.09	63.6
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	54.23	60.45
Bra010699.1-P	Field mustard	cytosol	57.54	58.29
KRH24439	Soybean	plastid	35.11	58.23
KRH51503	Soybean	cytosol	59.56	56.54
PGSC0003DMT400043532	Potato	cytosol	57.72	56.37
KRH60806	Soybean	cytosol	58.27	55.42
KRH29420	Soybean	cytosol, nucleus, plastid	56.99	55.06
Solyc10g053900.1.1	Tomato	cytosol, plastid	57.54	55.01
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	57.54	54.53
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	57.35	54.36
PGSC0003DMT400021690	Potato	nucleus	57.72	51.99
Solyc11g040280.1.1	Tomato	cytosol	56.99	51.84
GSMUA_Achr5P23630_001	Banana	cytosol	56.8	51.33
HORVU2Hr1G082530.1	Barley	cytosol	54.6	51.3
OQU84321	Sorghum	cytosol	52.76	50.89
GSMUA_Achr6P03210_001	Banana	cytosol	55.51	50.84
TraesCS2B01G354800.2	Wheat	nucleus	55.15	50.76
TraesCS2A01G327200.2	Wheat	nucleus	54.96	50.59
TraesCS2D01G335700.2	Wheat	nucleus	54.96	50.59
Os02t0440900-00	Rice	cytosol	55.15	50.17
Os10t0122600-01	Rice	cytosol, nucleus, plastid	54.96	50.0
OQU85018	Sorghum	nucleus	55.7	49.43
Zm00001d016601_P006	Maize	cytosol	54.96	49.42
Bra010700.1-P	Field mustard	cytosol	54.78	48.22
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	56.99	46.97
TraesCS6A01G097200.1	Wheat	plastid	51.47	45.68
Zm00001d015175_P002	Maize	plastid	54.04	45.58
Os02t0133200-01	Rice	plasma membrane	52.76	45.41
TraesCS6D01G085200.1	Wheat	plastid	51.29	45.37
Bra031196.1-P	Field mustard	cytosol	52.57	45.25
TraesCS6B01G125700.1	Wheat	plastid	50.92	45.04
Bra025754.1-P	Field mustard	nucleus	50.0	44.59
HORVU6Hr1G017580.5	Barley	plastid	51.47	44.59
Bra003757.1-P	Field mustard	cytosol	48.71	41.93
Bra024938.1-P	Field mustard	cytosol	29.41	39.8
Bra002841.1-P	Field mustard	cytosol	32.72	34.03
Bra030841.1-P	Field mustard	nucleus	35.29	32.05
Bra015089.1-P	Field mustard	cytosol	28.86	29.35
Bra013077.1-P	Field mustard	cytosol, plastid	70.96	26.46
Bra038021.1-P	Field mustard	cytosol	14.89	24.77
Bra030831.1-P	Field mustard	cytosol	14.52	24.31
Bra022153.1-P	Field mustard	cytosol	14.52	23.87
Bra024920.1-P	Field mustard	cytosol	13.79	22.46
Bra017468.1-P	Field mustard	cytosol	13.6	22.22
Bra028944.1-P	Field mustard	plastid	28.12	21.98
Bra038012.1-P	Field mustard	cytosol	39.71	20.42
Bra002840.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra034638	EnsemblPlants:Bra034638.1	EnsemblPlants:Bra034638.1-P
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR001251	InterPro:IPR036865	UniProt:M4F0P3	PFAM:PF00650
PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF77	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI0002546399	SEG:seg

Description

AT4G34580 (E=3e-281) COW1, SRH1 | COW1 (CAN OF WORMS1); phosphatidylinositol transporter/ transporter

Coordinates

chrA08:-:12344851..12348551

Molecular Weight (calculated)

62059.0 Da

IEP (calculated)

9.062

GRAVY (calculated)

-0.580

Length

544 amino acids

Sequence
(BLAST)

001: MSEEERKIVK MCSLKKKAIS ASNRFKNSFK KKGRRSTSRV MSVPIEDDID AEDLQALDAF RQALVLDELL PSKLDDLHMM LRFLRARKFD IEKAKQMWAD
101: MIQWRKDFGA DTIIEDFEFD EIDDVMKHYP QGYHGVDKEG RPVYIERLGQ IDANKLLQVT TMDRYVKYHV KEFEKTFKIK FPACSVAANK HIDQSTTILD
201: VQGVGLKNFS KSARELLQRL CKIDNENYPE TLNRMFIINA GSGFRLLWST VKSFLDPKTT AKIHVLGNKY HSKLLEVIDA SELPEFFGGA CTCEDKGGCM
301: RSDKGPWNDP EVLKMAINKE AKCSPISEDE HKHVDQGRST SVPESLERNN KKRDEDNAHE KQIATIDKSM DTAWPVKTQK SESFKVSKGL EGYVRKGAPK
401: KRDGLLVGGV MAFVMGIVAM VRLSKDVPRK LTEAALYGNS VCYEESMSKQ NKAQFAAPVS SSEYMLMVKR MAELEDKCMF LDLKPANVDS EKEEKLQAAL
501: NRVQVLEQEL TETKKALEEA LVSQKEILAY IEKKKKKKKL GMRS

Best Arabidopsis Sequence Match ( AT4G34580.1 )
(BLAST)

001: MAETKPEIEM SEEERKIVKI SSLKKKAINA SNRFKNSFKK KGRRSSSRVM SVPIEDDIDA EDLQALDAFR QALILDELLP SKLDDLHMML RFLRARKFDI
101: EKAKQMWSDM IQWRKDFGAD TIIEDFDFEE IDEVMKHYPQ GYHGVDKEGR PVYIERLGQI DANKLLQVTT MDRYVKYHVK EFEKTFKVKF PSCSVAANKH
201: IDQSTTILDV QGVGLKNFSK SARELLQRLC KIDNENYPET LNRMFIINAG SGFRLLWSTV KSFLDPKTTA KIHVLGNKYH SKLLEVIDAS ELPEFFGGAC
301: TCEDKGGCMR SDKGPWNDPE VLKIAINREA KCSPISEDEH KHVDQGRSTS GFESLERIKK KTDEDNVYEK QIATIDKSMD MAWLAKTQKA ENFPISKGLE
401: CYVRKGAPKK GDGLLVGGVM AFVMGIVAMV RLSKDVPRKL TEAALYGNSV CYEESTKSKQ NQGQFAAPVS SSEYMLMVKR MAELEDKCMF LDLKPAHVES
501: EKEEKLQAAL NRVQVLEQEL TETKKALEEA LVSQKEILAY IEKKKKKKKL FFGF

Arabidopsis Description

SFH1SRH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V672]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.