Factsheet for Bra038021.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52903	Canola	cytosol	99.69	99.69
Bra030831.1-P	Field mustard	cytosol	92.97	93.54
AT1G55840.1	Thale cress	cytosol	90.21	90.77
Os09t0258000-01	Rice	cytosol	65.44	63.88
TraesCS5A01G170000.1	Wheat	cytosol	64.83	63.28
EER96447	Sorghum	cytosol	64.83	63.28
TraesCS5B01G166800.1	Wheat	cytosol	64.83	63.28
TraesCS5D01G174400.1	Wheat	cytosol	64.83	63.28
Bra024920.1-P	Field mustard	cytosol	64.22	62.87
Bra022153.1-P	Field mustard	cytosol	63.61	62.84
HORVU5Hr1G052230.2	Barley	cytosol	64.22	62.5
Bra017468.1-P	Field mustard	cytosol	63.61	62.46
Zm00001d005118_P002	Maize	cytosol	60.86	50.51
Bra030295.1-P	Field mustard	cytosol	22.02	25.44
Bra024938.1-P	Field mustard	cytosol	22.63	18.41
Bra010699.1-P	Field mustard	cytosol	25.08	15.27
Bra034638.1-P	Field mustard	cytosol	24.77	14.89
Bra010700.1-P	Field mustard	cytosol	27.22	14.4
Bra031196.1-P	Field mustard	cytosol	27.52	14.24
Bra025754.1-P	Field mustard	nucleus	25.99	13.93
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	20.8	13.93
Bra003757.1-P	Field mustard	cytosol	25.99	13.45
Bra017663.1-P	Field mustard	cytosol, plastid	18.65	13.38
Bra011544.1-P	Field mustard	cytosol, plastid	19.88	13.13
Bra030841.1-P	Field mustard	nucleus	23.85	13.02
Bra002841.1-P	Field mustard	cytosol	20.49	12.81
Bra015089.1-P	Field mustard	cytosol	18.35	11.21
Bra028944.1-P	Field mustard	plastid	18.96	8.91
Bra038012.1-P	Field mustard	cytosol	25.08	7.75
Bra013077.1-P	Field mustard	cytosol, plastid	24.16	5.41
Bra002840.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra038021.1	EnsemblPlants:Bra038021.1-P	EnsemblPlantsGene:Bra038021	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	ncoils:Coil	PANTHER:PTHR23324
PANTHER:PTHR23324:SF140	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000253EDCB	UniProt:M4FAA7	MapMan:35.1	:

Description

AT1G55840 (E=2e-171) | SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein

Coordinates

chrA06:-:83275..85412

Molecular Weight (calculated)

37324.9 Da

IEP (calculated)

8.018

GRAVY (calculated)

-0.442

Length

327 amino acids

Sequence
(BLAST)

001: MSMASEEAVK QLRTLMEDVE DESLRESYRN IHQGYPTETL LRFLKARDFN VHKSHKMLLD CLEWRTQNEI DSILTKPIVP VELYRGIRDS QLVGLSGYSK
101: EGLPVIAIGV GHSTYDKASV HYYVQSHIQM NEYRDRVVLP SATKKQGRPI CTCLKILDMS GLKLSALSQI KLMTTITTID DLNYPEKTET YYIVNVPYIF
201: SACWKTIKPL LQERTKKKIQ VLKGCGKDEL LKVMDYESLP HFCRREGSGS GRHISNGAED NCFSLDHSFH QELYSYVKQQ ALVKGPSNAP IRHGSVHVRF
301: PEPATEGTKI FDTLESEFQK LGCDQKV

Best Arabidopsis Sequence Match ( AT1G55840.1 )
(BLAST)

001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI

Arabidopsis Description

At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.