Factsheet for Bra010699.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90317	Canola	cytosol	98.88	98.88
AT4G39180.1	Thale cress	cytosol	83.43	80.87
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	62.76	69.06
KRH24439	Soybean	plastid	39.11	64.02
Bra030295.1-P	Field mustard	cytosol	32.22	61.13
Bra034638.1-P	Field mustard	cytosol	58.29	57.54
KRH51503	Soybean	cytosol	60.89	57.07
KRH60806	Soybean	cytosol	60.52	56.82
KRH29420	Soybean	cytosol, nucleus, plastid	59.03	56.31
Bra011544.1-P	Field mustard	cytosol, plastid	51.02	55.35
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	57.73	54.01
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	57.36	53.66
Bra017663.1-P	Field mustard	cytosol, plastid	45.44	53.51
PGSC0003DMT400043532	Potato	cytosol	55.49	53.5
Solyc10g053900.1.1	Tomato	cytosol, plastid	55.87	52.72
GSMUA_Achr6P03210_001	Banana	cytosol	56.05	50.67
GSMUA_Achr5P23630_001	Banana	cytosol	56.8	50.66
Os02t0440900-00	Rice	cytosol	55.49	49.83
TraesCS2D01G335700.2	Wheat	nucleus	54.56	49.58
Os10t0122600-01	Rice	cytosol, nucleus, plastid	55.12	49.5
TraesCS2A01G327200.2	Wheat	nucleus	54.38	49.41
TraesCS2B01G354800.2	Wheat	nucleus	54.38	49.41
HORVU2Hr1G082530.1	Barley	cytosol	53.26	49.4
PGSC0003DMT400021690	Potato	nucleus	55.31	49.17
Solyc11g040280.1.1	Tomato	cytosol	54.56	49.0
OQU84321	Sorghum	cytosol	50.28	47.87
OQU85018	Sorghum	nucleus	54.56	47.8
Zm00001d016601_P006	Maize	cytosol	53.45	47.44
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	56.61	46.06
Bra010700.1-P	Field mustard	cytosol	52.14	45.31
TraesCS6B01G125700.1	Wheat	plastid	50.28	43.9
TraesCS6A01G097200.1	Wheat	plastid	50.09	43.88
Os02t0133200-01	Rice	plasma membrane	51.02	43.35
TraesCS6D01G085200.1	Wheat	plastid	49.35	43.09
Bra031196.1-P	Field mustard	cytosol	50.28	42.72
Zm00001d015175_P002	Maize	plastid	50.84	42.33
HORVU6Hr1G017580.5	Barley	plastid	49.35	42.2
Bra025754.1-P	Field mustard	nucleus	46.37	40.82
Bra003757.1-P	Field mustard	cytosol	47.3	40.19
Bra024938.1-P	Field mustard	cytosol	29.42	39.3
Bra030841.1-P	Field mustard	nucleus	38.73	34.72
Bra002841.1-P	Field mustard	cytosol	33.33	34.23
Bra015089.1-P	Field mustard	cytosol	30.91	31.03
Bra022153.1-P	Field mustard	cytosol	15.64	25.38
Bra038021.1-P	Field mustard	cytosol	15.27	25.08
Bra017468.1-P	Field mustard	cytosol	15.27	24.62
Bra030831.1-P	Field mustard	cytosol	14.9	24.62
Bra024920.1-P	Field mustard	cytosol	15.08	24.25
Bra028944.1-P	Field mustard	plastid	29.98	23.13
Bra038012.1-P	Field mustard	cytosol	42.46	21.55
Bra013077.1-P	Field mustard	cytosol, plastid	54.75	20.15
Bra002840.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra010699	EnsemblPlants:Bra010699.1	EnsemblPlants:Bra010699.1-P
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR001251	InterPro:IPR036865	UniProt:M4D2J9	PFAM:PF00650
PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF144	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI0002546968	SEG:seg

Description

AT4G39180 (E=1e-244) SEC14, ATSEC14 | SEC14; phosphatidylinositol transporter

Coordinates

chrA08:+:16039945..16042541

Molecular Weight (calculated)

61832.0 Da

IEP (calculated)

9.300

GRAVY (calculated)

-0.611

Length

537 amino acids

Sequence
(BLAST)

001: MTETMAEISE DEKRLTKLCS LKKKAINATN KFKHSMTKRG RRHSRVRCVS IVDEIDTEEL RQVDAFRQAL ILEELLPSKH DDHHMMLRFL RARKFDIEKA
101: KQMWADMLNW RKDYGADTIM EDFDFGEIDE VVKYYPQGYH GVDKEGRPVY IERLGQVDAV KLMKVTTIDR YVKYHVKEFE KTFTVKFPAC SIAAKRHIDQ
201: STTILDVQGV GLNNFNKAAK DLLQSIQKID SDNYPETLNR MFIINAGYGF RLVWSGVKSF LDPKTTAKIH VLSNKYQSKL LEIIDANELP EFLGGKCTCA
301: DKGGCMRSDK GPWNDPEIFK LVQNGEGRCP RKSSSGIEEK TISVCKNVTE EKREVFEPEE TYKKAAAEME KFIDKTVDTG AYPTQEHHKA KNIVPDPKDL
401: LLSPAVESKG YLYGSVMALL MGIVGVMRLT KNMPRKRTQG NVYPYGVTVM PTQEYRAMVK KMTDLEEKCK SMEAAQVAIS MEREKVLDAA LRRVDQLELQ
501: LSETKKALDE TMTRQHEIMA YIEKKKKKKR KWIPEKT

Best Arabidopsis Sequence Match ( AT4G39180.1 )
(BLAST)

001: MADTMVAHMD RHNKIDVEIS EDDKRLTKLC SLKKKAINAT NKFKHSMTKK GRRHSRVACV SIVDEIDTEE LQAVDAFRQA LILDELLPSK HDDHHMMLRF
101: LRARKFDLEK AKQMWSDMLN WRKEYGADTI MEDFDFKEIE EVVKYYPQGY HGVDKEGRPI YIERLGQVDA TKLMKVTTID RYVKYHVKEF EKTFNVKFPA
201: CSIAAKRHID QSTTILDVQG VGLSNFNKAA KDLLQSIQKI DNDNYPETLN RMFIINAGCG FRLLWNTVKS FLDPKTTAKI HVLGNKYQTK LLEIIDANEL
301: PEFLGGKCTC ADKGGCMRSD KGPWNDPEIF KLVQNGEGRC LRRSLSGIEE KTIFEYNNET KKKCEPEETH KQSAAEMEKK FIDTNVDAAA AADWPTKLNK
401: AEKNPTDLKD VYSAVNPLER KGYLYGSVMA LLMGIVGVMR LTKNMPRRLT EANVYSREGS AVYQDGVTVM SKQEYIAMVK KITDLEEKCK SMEAQAAFYM
501: EREKTLDAAL RRIDQLELQL SETNKALDET MTRQHEIMAF IEKKKKKKRK FLLF

Arabidopsis Description

SFH2Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 [Source:UniProtKB/Swiss-Prot;Acc:F4JVA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.