Factsheet for Bra024920.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17710	Canola	cytosol	99.1	99.1
Bra017468.1-P	Field mustard	cytosol	88.32	88.59
Bra022153.1-P	Field mustard	cytosol	86.83	87.61
AT5G47730.1	Thale cress	cytosol	86.83	85.04
KRH51210	Soybean	cytosol	69.46	71.38
KRH11617	Soybean	cytosol	69.76	70.82
KRH01941	Soybean	cytosol	68.26	70.37
KRH36621	Soybean	cytosol	69.16	70.21
VIT_10s0116g00400.t01	Wine grape	cytosol	69.16	68.34
GSMUA_Achr7P06060_001	Banana	cytosol	67.66	67.87
GSMUA_Achr3P12050_001	Banana	cytosol	66.77	66.77
Bra038021.1-P	Field mustard	cytosol	62.87	64.22
EER90026	Sorghum	cytosol	63.17	63.94
Os02t0200000-01	Rice	cytosol	62.57	63.91
GSMUA_Achr1P19200_001	Banana	cytosol	64.37	63.8
Bra030831.1-P	Field mustard	cytosol	61.98	63.69
GSMUA_Achr3P28070_001	Banana	cytosol	64.07	63.69
TraesCS6A01G164200.1	Wheat	cytosol	61.98	63.3
TraesCS6B01G188100.1	Wheat	cytosol	61.98	63.3
TraesCS6D01G149100.1	Wheat	cytosol	61.98	63.3
TraesCS7A01G378400.1	Wheat	cytosol	61.38	63.08
TraesCS7B01G280200.2	Wheat	cytosol	61.08	62.77
TraesCS7D01G375200.1	Wheat	cytosol	61.08	62.77
PGSC0003DMT400034789	Potato	cytosol	63.17	62.43
Solyc11g012790.1.1	Tomato	cytosol	63.17	62.43
EES04709	Sorghum	cytosol	61.08	62.39
Zm00001d015785_P001	Maize	extracellular	60.78	62.08
GSMUA_Achr4P13090_001	Banana	cytosol	61.08	60.71
HORVU6Hr1G032510.1	Barley	cytosol, nucleus, peroxisome	61.98	60.17
GSMUA_Achr1P09480_001	Banana	cytosol	60.18	60.0
HORVU7Hr1G090330.11	Barley	cytosol, nucleus, plastid	60.48	59.41
Zm00001d046538_P003	Maize	cytosol	63.77	54.2
Zm00001d053648_P005	Maize	cytosol, endoplasmic reticulum, plastid	52.69	51.01
Os06t0607200-01	Rice	cytosol	20.06	46.21
Bra030295.1-P	Field mustard	cytosol	20.96	24.73
Bra024938.1-P	Field mustard	cytosol	22.46	18.66
Bra010699.1-P	Field mustard	cytosol	24.25	15.08
Bra017663.1-P	Field mustard	cytosol, plastid	18.86	13.82
Bra034638.1-P	Field mustard	cytosol	22.46	13.79
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	20.06	13.73
Bra011544.1-P	Field mustard	cytosol, plastid	19.46	13.13
Bra010700.1-P	Field mustard	cytosol	24.25	13.11
Bra030841.1-P	Field mustard	nucleus	23.35	13.02
Bra031196.1-P	Field mustard	cytosol	24.25	12.82
Bra025754.1-P	Field mustard	nucleus	23.05	12.62
Bra002841.1-P	Field mustard	cytosol	18.56	11.85
Bra003757.1-P	Field mustard	cytosol	22.16	11.71
Bra015089.1-P	Field mustard	cytosol	16.17	10.09
Bra028944.1-P	Field mustard	plastid	17.66	8.48
Bra038012.1-P	Field mustard	cytosol	23.65	7.47
Bra013077.1-P	Field mustard	cytosol, plastid	23.35	5.35
Bra002840.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra024920.1	EnsemblPlants:Bra024920.1-P	EnsemblPlantsGene:Bra024920	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF140
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI000253FA1E	UniProt:M4E814	MapMan:35.1	:	:

Description

AT5G47730 (E=2e-169) | SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putative

Coordinates

chrA06:+:24253585..24255576

Molecular Weight (calculated)

37747.2 Da

IEP (calculated)

8.226

GRAVY (calculated)

-0.392

Length

334 amino acids

Sequence
(BLAST)

001: MGIVSEEEAI DELQKLINQV EGPLKKTFER VHQGYLRENL SRFLKARDWN VSKAHTMLLD CLRWRVDSGI DSILSKPIVP SELYRDVRDS QLIGMSGYTR
101: EGLPVFAIGV GLSTFDKASV HYYVQSHIQI NEYRDRVLLP SMSKKNGRPI TTCVKVLDMT GLKLSALSQI KLVTIISTID DLNYPEKTNT YYVVNAPYIF
201: SACWKVVKPL LHERTTKKVH VLSGSGKDEL LKIMDYTSLP HFCRRGSSGS SHHTQSVDCF SVDHPFHQQL YSYVKHHYET QGQGEPAKQG SFHVGFPEPG
301: ADGVQIVKTI ESEMHNLENR NGLGKPVDDR TVSP

Best Arabidopsis Sequence Match ( AT5G47730.1 )
(BLAST)

001: MGIVSEEAID EFQELMDQVE EPLKKTYERV HQGYLRENLG RFLKARDWNV CKAHTMLVEC LRWRVDNEID SILSKPIVPT ELYRDVRDSQ LIGMSGYTKE
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L

Arabidopsis Description

At5g47730 [Source:UniProtKB/TrEMBL;Acc:Q9FIK6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.