Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024920.1-P | Field mustard | cytosol | 99.1 | 99.1 |
| CDX77792 | Canola | cytosol | 98.2 | 98.2 |
| CDY40544 | Canola | cytosol | 87.72 | 88.79 |
| CDY41066 | Canola | cytosol | 88.02 | 88.29 |
| CDY28908 | Canola | cytosol | 87.43 | 88.22 |
| CDY25949 | Canola | cytosol | 87.13 | 87.39 |
| AT5G47730.1 | Thale cress | cytosol | 86.53 | 84.75 |
| KRH51210 | Soybean | cytosol | 69.46 | 71.38 |
| KRH11617 | Soybean | cytosol | 69.76 | 70.82 |
| KRH01941 | Soybean | cytosol | 68.26 | 70.37 |
| KRH36621 | Soybean | cytosol | 69.16 | 70.21 |
| VIT_10s0116g00400.t01 | Wine grape | cytosol | 68.86 | 68.05 |
| GSMUA_Achr7P06060_001 | Banana | cytosol | 67.66 | 67.87 |
| GSMUA_Achr3P12050_001 | Banana | cytosol | 66.47 | 66.47 |
| CDY52903 | Canola | cytosol | 63.17 | 64.53 |
| CDY53762 | Canola | cytosol | 62.87 | 64.22 |
| CDY42389 | Canola | cytosol | 62.28 | 64.0 |
| CDY10527 | Canola | cytosol | 62.28 | 64.0 |
| EER90026 | Sorghum | cytosol | 63.17 | 63.94 |
| Os02t0200000-01 | Rice | cytosol | 62.57 | 63.91 |
| GSMUA_Achr3P28070_001 | Banana | cytosol | 63.77 | 63.39 |
| TraesCS6D01G149100.1 | Wheat | cytosol | 61.98 | 63.3 |
| TraesCS6A01G164200.1 | Wheat | cytosol | 61.98 | 63.3 |
| TraesCS6B01G188100.1 | Wheat | cytosol | 61.98 | 63.3 |
| GSMUA_Achr1P19200_001 | Banana | cytosol | 63.77 | 63.2 |
| TraesCS7A01G378400.1 | Wheat | cytosol | 61.38 | 63.08 |
| TraesCS7D01G375200.1 | Wheat | cytosol | 61.08 | 62.77 |
| TraesCS7B01G280200.2 | Wheat | cytosol | 61.08 | 62.77 |
| PGSC0003DMT400034789 | Potato | cytosol | 63.17 | 62.43 |
| Solyc11g012790.1.1 | Tomato | cytosol | 63.17 | 62.43 |
| EES04709 | Sorghum | cytosol | 61.08 | 62.39 |
| Zm00001d015785_P001 | Maize | extracellular | 60.78 | 62.08 |
| GSMUA_Achr4P13090_001 | Banana | cytosol | 60.78 | 60.42 |
| HORVU6Hr1G032510.1 | Barley | cytosol, nucleus, peroxisome | 61.98 | 60.17 |
| GSMUA_Achr1P09480_001 | Banana | cytosol | 59.88 | 59.7 |
| HORVU7Hr1G090330.11 | Barley | cytosol, nucleus, plastid | 60.48 | 59.41 |
| Zm00001d046538_P003 | Maize | cytosol | 63.77 | 54.2 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 52.4 | 50.72 |
| Os06t0607200-01 | Rice | cytosol | 20.06 | 46.21 |
| CDX99587 | Canola | cytosol, mitochondrion | 20.36 | 24.03 |
| CDY15888 | Canola | cytosol | 20.06 | 23.67 |
| CDY11954 | Canola | cytosol | 11.08 | 18.97 |
| CDX77773 | Canola | cytosol | 22.46 | 18.43 |
| CDY17730 | Canola | cytosol | 22.16 | 18.41 |
| CDX89709 | Canola | cytosol, mitochondrion | 20.66 | 15.16 |
| CDY11957 | Canola | cytosol | 20.06 | 15.06 |
| CDX90317 | Canola | cytosol | 23.65 | 14.71 |
| CDY12126 | Canola | cytosol | 23.35 | 14.58 |
| CDY15887 | Canola | cytosol | 23.95 | 14.57 |
| CDX99586 | Canola | cytosol | 23.95 | 14.55 |
| CDX69071 | Canola | cytosol | 22.46 | 14.04 |
| CDX75444 | Canola | cytosol | 22.46 | 14.04 |
| CDY45318 | Canola | cytosol, plastid | 20.96 | 14.0 |
| CDY52084 | Canola | cytosol | 23.35 | 13.29 |
| CDX82040 | Canola | cytosol | 23.95 | 13.27 |
| CDY42378 | Canola | nucleus | 25.45 | 13.22 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 25.15 | 13.06 |
| CDY39363 | Canola | cytosol | 22.75 | 12.84 |
| CDY12125 | Canola | cytosol | 23.65 | 12.82 |
| CDY13810 | Canola | cytosol | 24.25 | 12.82 |
| CDY17469 | Canola | cytosol | 21.86 | 12.78 |
| CDX90316 | Canola | cytosol | 23.65 | 12.78 |
| CDX77382 | Canola | cytosol | 23.35 | 12.6 |
| CDX76291 | Canola | cytosol | 21.86 | 12.33 |
| CDY29415 | Canola | nucleus | 22.46 | 12.2 |
| CDX85889 | Canola | cytosol | 22.16 | 12.19 |
| CDY50018 | Canola | vacuole | 23.05 | 12.05 |
| CDY36780 | Canola | plastid | 20.36 | 11.93 |
| CDX68133 | Canola | cytosol | 21.56 | 11.84 |
| CDY17397 | Canola | cytosol | 20.36 | 11.43 |
| CDY51966 | Canola | cytosol | 20.06 | 11.26 |
| CDX69225 | Canola | mitochondrion | 19.76 | 10.87 |
| CDY51073 | Canola | mitochondrion, nucleus | 14.97 | 9.78 |
| CDY02262 | Canola | cytosol, plastid | 22.75 | 5.27 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY17710 | EnsemblPlantsGene:GSBRNA2T00001935001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF140 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | ProteinID:CDY17710 | ProteinID:CDY17710.1 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EF37CC | UniProt:A0A078FT57 | MapMan:35.1 | : |
Description
BnaA06g35290DBnaA06g35290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FT57]
Coordinates
chrLK032076:+:686364..688805
Molecular Weight (calculated)
37756.2 Da
IEP (calculated)
7.673
GRAVY (calculated)
-0.378
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIVSEEEAI DELQKLINQV EGPLKKTFER VHQGYLRENL SRFLKARDWN VSKAHTMLLD CLRWRVDSEI DSILSKPIVP SELYRDVRDS QLIGMSGYTR
101: EGLPVFAIGV GLSTFDKASV HYYVQSHIQI NEYRDRVLLS SMSKKNGRPI TTCVKVLDMT GLKLSALSQI KLVTIISTID DLNYPEKTNT YYVVNAPYIF
201: SACWKVVKPL LHERTTKKVH VLSGSGKDEL LKIMDYTSLP HFCRRGSSGS SHHTQSVDCF SVDHPFHQQL YSYVKHHYET QGQGEPAKQG SFHVGFPEPG
301: ADGVQIVKTI ESEMHNLENC NGLGKPVDDR TVSP
101: EGLPVFAIGV GLSTFDKASV HYYVQSHIQI NEYRDRVLLS SMSKKNGRPI TTCVKVLDMT GLKLSALSQI KLVTIISTID DLNYPEKTNT YYVVNAPYIF
201: SACWKVVKPL LHERTTKKVH VLSGSGKDEL LKIMDYTSLP HFCRRGSSGS SHHTQSVDCF SVDHPFHQQL YSYVKHHYET QGQGEPAKQG SFHVGFPEPG
301: ADGVQIVKTI ESEMHNLENC NGLGKPVDDR TVSP
001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
Arabidopsis Description
At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.