Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17730 | Canola | cytosol | 95.82 | 97.01 |
| AT5G47510.4 | Thale cress | cytosol | 75.43 | 81.43 |
| Zm00001d019582_P001 | Maize | cytosol | 42.26 | 53.75 |
| Os07t0456500-01 | Rice | cytosol | 29.24 | 50.21 |
| TraesCS2D01G500100.2 | Wheat | mitochondrion | 44.72 | 46.55 |
| TraesCS2A01G499900.1 | Wheat | mitochondrion | 44.72 | 46.31 |
| HORVU2Hr1G111160.14 | Barley | mitochondrion | 44.72 | 46.19 |
| TraesCS2B01G527900.2 | Wheat | mitochondrion | 44.47 | 45.94 |
| CDX99587 | Canola | cytosol, mitochondrion | 31.2 | 44.88 |
| CDY15888 | Canola | cytosol | 30.71 | 44.17 |
| OQU88968 | Sorghum | cytosol | 43.73 | 43.31 |
| VIT_02s0154g00510.t01 | Wine grape | cytosol | 40.79 | 43.12 |
| KRH28067 | Soybean | cytosol | 48.65 | 43.04 |
| KRH77370 | Soybean | cytosol | 48.89 | 42.98 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 38.82 | 42.59 |
| Solyc08g078680.2.1 | Tomato | cytosol | 49.39 | 41.88 |
| CDY11954 | Canola | cytosol | 19.66 | 41.03 |
| CDY11957 | Canola | cytosol | 37.1 | 33.93 |
| CDX89709 | Canola | cytosol, mitochondrion | 36.12 | 32.31 |
| CDX69071 | Canola | cytosol | 39.56 | 30.15 |
| CDX75444 | Canola | cytosol | 39.56 | 30.15 |
| CDY45318 | Canola | cytosol, plastid | 36.12 | 29.4 |
| CDX90317 | Canola | cytosol | 38.57 | 29.24 |
| CDY12126 | Canola | cytosol | 37.84 | 28.79 |
| CDY15887 | Canola | cytosol | 38.82 | 28.78 |
| CDX99586 | Canola | cytosol | 38.82 | 28.73 |
| CDY17469 | Canola | cytosol | 39.56 | 28.2 |
| CDX76291 | Canola | cytosol | 39.56 | 27.2 |
| CDY39363 | Canola | cytosol | 38.57 | 26.52 |
| CDY36780 | Canola | plastid | 37.1 | 26.49 |
| CDY51966 | Canola | cytosol | 38.57 | 26.39 |
| CDY17397 | Canola | cytosol | 38.33 | 26.22 |
| CDX82040 | Canola | cytosol | 38.33 | 25.87 |
| CDX85889 | Canola | cytosol | 38.33 | 25.7 |
| CDY29415 | Canola | nucleus | 38.57 | 25.53 |
| CDX68133 | Canola | cytosol | 38.08 | 25.49 |
| CDY52084 | Canola | cytosol | 36.12 | 25.04 |
| CDX90316 | Canola | cytosol | 37.84 | 24.92 |
| CDY13810 | Canola | cytosol | 38.57 | 24.84 |
| CDY12125 | Canola | cytosol | 37.59 | 24.84 |
| CDX69225 | Canola | mitochondrion | 36.12 | 24.22 |
| CDY25949 | Canola | cytosol | 19.66 | 24.02 |
| CDX77382 | Canola | cytosol | 36.36 | 23.91 |
| CDY28908 | Canola | cytosol | 19.41 | 23.87 |
| CDY41066 | Canola | cytosol | 19.41 | 23.72 |
| CDY50018 | Canola | vacuole | 37.1 | 23.63 |
| CDY42378 | Canola | nucleus | 37.1 | 23.48 |
| CDY40544 | Canola | cytosol | 18.92 | 23.33 |
| CDY51073 | Canola | mitochondrion, nucleus | 29.24 | 23.29 |
| CDY53762 | Canola | cytosol | 18.67 | 23.24 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 36.61 | 23.17 |
| CDY52903 | Canola | cytosol | 18.43 | 22.94 |
| CDX77792 | Canola | cytosol | 18.67 | 22.75 |
| CDY17710 | Canola | cytosol | 18.43 | 22.46 |
| CDY10527 | Canola | cytosol | 17.69 | 22.15 |
| CDY42389 | Canola | cytosol | 17.69 | 22.15 |
| CDY02262 | Canola | cytosol, plastid | 37.84 | 10.69 |
| CDY36781 | Canola | extracellular | 0.49 | 1.19 |
Protein Annotations
| Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | GO:A0A078CRJ7 | EnsemblPlants:CDX77773 | ProteinID:CDX77773 |
| ProteinID:CDX77773.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil |
| EnsemblPlantsGene:GSBRNA2T00128811001 | InterPro:IPR001251 | InterPro:IPR036865 | PFAM:PF00650 | PRINTS:PR00180 | PFscan:PS50191 |
| PANTHER:PTHR23324 | PANTHER:PTHR23324:SF63 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI0004EF42C3 | : | : | : | : | : |
Description
BnaC07g20270D
Coordinates
chrLK031812:+:1736345..1738565
Molecular Weight (calculated)
46439.4 Da
IEP (calculated)
6.635
GRAVY (calculated)
-0.598
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MQETEVSARD IHISDGSEEE DSMQPDLFHE HHTSNNEQMV EAFRNLLLLH GQLPAKHGDR NTLLRFLKMR DFDLGKAKDA FLNYMKWRVD SKVDMISKEF
101: KYEEYGEVKR HYPHGFHKVD KSGRPIYIER LGMVDLNAFL KATTIERYVK YHIKEQEKTL SLRYPACSIA SEKHVSSTTT ILDVSGLGMS NFSKSARSLF
201: MEIQKIDSNY YPETLHRLFV VNANSGFRML WLALKTFLDA RTLAKVQVLG PNYLGELLEA IDPSNLPTFL GGNCTCSDRG GCLFSDEGPW NDPNIEAKIQ
301: ETFTMGDADS EEHTMDKVSE NASTNQKENS GKNMITLKKY ASLRDAVKEA QKRIEMLEMS LHETKRAMNG LSEIIETIKP NQTETTNSQM QTGLDRKPIV
401: RKMSGLS
101: KYEEYGEVKR HYPHGFHKVD KSGRPIYIER LGMVDLNAFL KATTIERYVK YHIKEQEKTL SLRYPACSIA SEKHVSSTTT ILDVSGLGMS NFSKSARSLF
201: MEIQKIDSNY YPETLHRLFV VNANSGFRML WLALKTFLDA RTLAKVQVLG PNYLGELLEA IDPSNLPTFL GGNCTCSDRG GCLFSDEGPW NDPNIEAKIQ
301: ETFTMGDADS EEHTMDKVSE NASTNQKENS GKNMITLKKY ASLRDAVKEA QKRIEMLEMS LHETKRAMNG LSEIIETIKP NQTETTNSQM QTGLDRKPIV
401: RKMSGLS
001: MQETDRDIHI SDGTMNKEEQ SPNNEEMVEA FRNLLLLHGH LPDKHGDHNT LRRFLKMRDF DLEKSKEAFL NYMKWRVDYK VDLISQKFKF EEYGEVKKHY
101: PHGFHKVDKT GRPIYIERLG MTDLNAFLKA TTIERYVNYH IKEQEKTMSL RYPACSIASD KHVSSTTTIL DVSGVGMSNF SKPARSLFME IQKIDSNYYP
201: ETLHRLFVVN ASSGFRMLWL ALKTFLDART LAKVQVLGPN YLGELLEAIE PSNLPTFLGG NCTCSDHGGC LFSDEGPWND PGIKEKIEEP STIEDAHSET
301: MDKVSENAPA NQKESLGEVM ITMEKYAALK TAVKDSQKRI EMLEISLHET KKVLNGLAEI IEAIQPNQPI TKCKPV
101: PHGFHKVDKT GRPIYIERLG MTDLNAFLKA TTIERYVNYH IKEQEKTMSL RYPACSIASD KHVSSTTTIL DVSGVGMSNF SKPARSLFME IQKIDSNYYP
201: ETLHRLFVVN ASSGFRMLWL ALKTFLDART LAKVQVLGPN YLGELLEAIE PSNLPTFLGG NCTCSDHGGC LFSDEGPWND PGIKEKIEEP STIEDAHSET
301: MDKVSENAPA NQKESLGEVM ITMEKYAALK TAVKDSQKRI EMLEISLHET KKVLNGLAEI IEAIQPNQPI TKCKPV
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:TAIR;Acc:AT5G47510]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.