CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11954	Canola	cytosol	32.81	74.87
CDY36780	Canola	plastid	93.48	72.98
Zm00001d039981_P001	Maize	cytosol	17.08	61.79
AT5G56160.1	Thale cress	cytosol	74.61	57.54
CDY51966	Canola	cytosol	76.85	57.48
CDY17397	Canola	cytosol	76.4	57.14
Zm00001d031251_P001	Maize	cytosol, mitochondrion	15.51	53.49
HORVU1Hr1G088100.1	Barley	cytosol	19.1	52.8
CDX99587	Canola	cytosol, mitochondrion	30.34	47.7
CDY15888	Canola	cytosol	29.66	46.64
HORVU7Hr1G037200.1	Barley	nucleus	21.57	44.86
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	22.25	44.2
HORVU3Hr1G112740.3	Barley	nucleus	21.8	43.3
Zm00001d014589_P001	Maize	cytosol	8.99	41.24
Zm00001d045670_P001	Maize	cytosol	17.3	40.96
CDY42378	Canola	nucleus	57.08	39.5
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	26.29	39.39
CDY10540	Canola	cytosol, nucleus, plastid	56.85	39.35
GSMUA_Achr4P09770_001	Banana	cytosol	40.22	39.25
CDY50018	Canola	vacuole	55.96	38.97
Zm00001d043774_P001	Maize	cytosol	7.19	37.65
CDY17730	Canola	cytosol	33.93	37.56
CDY51073	Canola	mitochondrion, nucleus	42.92	37.38
CDX77773	Canola	cytosol	33.93	37.1
GSMUA_Achr7P06190_001	Banana	cytosol	47.42	36.57
Zm00001d012531_P001	Maize	mitochondrion	10.56	35.88
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	48.99	35.74
CDY15887	Canola	cytosol	44.04	35.7
CDX99586	Canola	cytosol	44.04	35.64
CDX90317	Canola	cytosol	42.92	35.57
CDY12126	Canola	cytosol	42.7	35.51
GSMUA_Achr3P04130_001	Banana	nucleus	48.54	34.67
KXG40069	Sorghum	nucleus	48.99	34.6
CDY52084	Canola	cytosol	45.62	34.58
CDX89709	Canola	cytosol, mitochondrion	35.28	34.51
Os08t0497300-01	Rice	cytosol, plastid	46.74	34.44
GSMUA_Achr5P04200_001	Banana	plastid	48.31	34.4
TraesCS2B01G533900.1	Wheat	nucleus	48.54	34.29
CDY45318	Canola	cytosol, plastid	38.43	34.2
TraesCS2D01G506400.1	Wheat	nucleus	48.31	33.97
HORVU6Hr1G071770.19	Barley	cytosol	46.97	33.82
EER96946	Sorghum	cytosol, nucleus, plastid	45.39	33.72
CDX75444	Canola	cytosol	40.45	33.71
CDX69071	Canola	cytosol	40.45	33.71
Os02t0721800-01	Rice	cytosol	46.29	33.66
Os08t0341700-01	Rice	nucleus	48.09	33.59
TraesCS7D01G238000.2	Wheat	cytosol	45.62	33.55
OQU80990	Sorghum	cytosol	45.62	33.44
TraesCS6D01G265200.1	Wheat	cytosol	46.52	33.44
TraesCS6A01G284800.1	Wheat	cytosol	46.52	33.39
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	14.83	33.33
TraesCS6B01G313500.1	Wheat	cytosol	46.29	33.28
KXG30865	Sorghum	cytosol	46.07	33.23
Zm00001d005995_P003	Maize	nucleus	44.72	33.22
HORVU1Hr1G091860.1	Barley	cytosol	12.13	33.13
Os09t0481100-01	Rice	nucleus	45.39	33.06
Zm00001d017876_P018	Maize	cytosol	45.39	32.74
CDX77382	Canola	cytosol	45.39	32.63
CDY39363	Canola	cytosol	43.37	32.6
Zm00001d051674_P037	Maize	cytosol	44.49	32.35
CDX85889	Canola	cytosol	43.82	32.13
Zm00001d031316_P020	Maize	cytosol	46.52	32.09
CDX68133	Canola	cytosol	43.82	32.07
CDY12125	Canola	cytosol	44.04	31.82
CDX90316	Canola	cytosol	44.04	31.72
HORVU7Hr1G048880.11	Barley	mitochondrion	46.07	31.68
CDX82040	Canola	cytosol	42.92	31.68
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	46.97	31.67
CDY29415	Canola	nucleus	43.6	31.54
CDY17469	Canola	cytosol	40.45	31.52
CDY13810	Canola	cytosol	43.6	30.7
TraesCS7B01G135600.2	Wheat	plastid	45.84	30.58
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	46.07	30.55
CDX76291	Canola	cytosol	40.45	30.41
Zm00001d037983_P001	Maize	cytosol	15.96	30.08
Zm00001d045718_P001	Maize	cytosol	17.08	30.04
CDX69225	Canola	mitochondrion	39.78	29.16
Zm00001d050131_P002	Maize	cytosol	41.12	28.64
Zm00001d052840_P016	Maize	plastid	46.29	28.41
Zm00001d010393_P001	Maize	plastid	21.57	26.37
CDY53762	Canola	cytosol	16.4	22.32
CDY52903	Canola	cytosol	16.4	22.32
CDY28908	Canola	cytosol	15.96	21.45
CDY25949	Canola	cytosol	15.96	21.32
CDY41066	Canola	cytosol	15.96	21.32
CDY10527	Canola	cytosol	15.51	21.23
CDY42389	Canola	cytosol	15.51	21.23
CDY40544	Canola	cytosol	15.73	21.21
Zm00001d047488_P001	Maize	nucleus	7.42	20.62
CDX77792	Canola	cytosol	15.28	20.36
CDY17710	Canola	cytosol	15.06	20.06
Zm00001d035370_P003	Maize	plastid	12.58	13.73
CDY02262	Canola	cytosol, plastid	40.22	12.42
Zm00001d005778_P001	Maize	plastid	7.42	11.74
CDY36781	Canola	extracellular	0.67	1.79

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A078FG38	EnsemblPlants:CDY11957	ProteinID:CDY11957
ProteinID:CDY11957.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlantsGene:GSBRNA2T00060806001
InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF84
SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0004EDDF7C	SEG:seg

Description

BnaC03g13830DBnaC03g13830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FG38]

Coordinates

chrLK032015:-:616152..619031

Molecular Weight (calculated)

50697.4 Da

IEP (calculated)

6.164

GRAVY (calculated)

-0.559

Length

445 amino acids

Sequence
(BLAST)

001: MSGGCGHTID KLSDSEDIER SRIGSPAKKV ISCSIEDVRD ENDEKIVLKL RQELLNKHSL PPRHDDYHML LRFLKTMDFN IDKTVTAWEE MLKWRNDFGA
101: DQIIQDFNFN ELDQVTMYYP QGYHGVDKNG RPIYIERLGK AHPGKLMDVT TIDRYLKYHV QEFEKALQQK LPACSIAAKR RVTTTTTILD ADGLGMKNFS
201: PAAANLLSSI AKVDCSYYPE TLHRMFIVNA GFGFRSLIWP AAQKFLDPVT IAKIQVLEPK SLSKLLETID SSQLPDFLGG VCTCANEGGC LRSNKGPWND
301: PEIAEALHHM EVNPIPQTTK DPLHVRDHDS QEEWSQPQLL NTSSENSSST NTSRREDSSI NREIVLQCLD RLKKLEKECT EISRIPVKTP DENEKLLTGT
401: LERIKSLELD LDKTQSVLHL TLAKQLQITE QLDSHYEEQR KRCCI

Best Arabidopsis Sequence Match ( AT5G56160.1 )
(BLAST)

001: MSGREQTGEK LSDSEYIEEE PRRSRIGNLK KKAFSCSTKL THPLKMRKGK RKIDFQIPLI EDVRDEKEEK LVSKLRQQLL QKDLLPPVHD DYHMLLRFLK
101: TMEFKIEKTV TAWEEMLKWR KEFGTDRIIQ DFNFKELDEV TRHYPQGYHG VDKDGRPIYI ERLGKAHPGK LMEVTTIERY LKYHVQEFER TLQEKLPACS
201: VAAKRRVTTT TTILDVEGLG MKNFTPTAAN LLATIAKVDC NYYPETLHRM FIVNAGIGFR SFLWPAAQKL LDPMTIAKIQ VLEPRSLSKL LEAIDSSQLP
301: EFLGGLCKCP NEGGCLRSNK GPWNDPEIVE LVHHMEVNNV PQTTTAPLHV RDYDSTTCTI SPKETLKEEP EPEEYYSSTG SRSSMHTCIV PPLSDKASTS
401: DGDKFITTVE SIESAQSQLL DADTENTFAN TSVREGGQIL RFGALREKIN SENIFHLVKI LLVFPLKLFV LFGFLLPGYW QRQNTVVVPD SSTNNKVLEC
501: FDRLKKMEKE FTEISRKQVK IPEANEKLLA ESLERIKSLE LDLDKTKSVL HITLTKQLQI TEQLESQDEE RRKGCCF

Arabidopsis Description

SFH14Phosphatidylinositol/phosphatidylcholine transfer protein SFH14 [Source:UniProtKB/Swiss-Prot;Acc:F4K6D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.