Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G037200.1 | Barley | nucleus | 89.73 | 93.93 |
| HORVU1Hr1G088100.1 | Barley | cytosol | 66.07 | 91.93 |
| HORVU7Hr1G040650.2 | Barley | cytosol, nucleus, plastid | 87.05 | 87.05 |
| HORVU1Hr1G091860.1 | Barley | cytosol | 28.57 | 39.26 |
| TraesCS2B01G533900.1 | Wheat | nucleus | 92.41 | 32.86 |
| TraesCS2D01G506400.1 | Wheat | nucleus | 92.41 | 32.7 |
| KXG40069 | Sorghum | nucleus | 82.59 | 29.37 |
| Os08t0341700-01 | Rice | nucleus | 83.48 | 29.36 |
| CDY11954 | Canola | cytosol | 25.45 | 29.23 |
| Zm00001d050131_P002 | Maize | cytosol | 79.91 | 28.01 |
| GSMUA_Achr7P06190_001 | Banana | cytosol | 67.41 | 26.17 |
| KRH45371 | Soybean | cytosol | 50.45 | 25.68 |
| GSMUA_Achr3P11960_001 | Banana | cytosol, plastid | 67.41 | 24.75 |
| Bra030841.1-P | Field mustard | nucleus | 60.27 | 22.54 |
| Bra002841.1-P | Field mustard | cytosol | 51.34 | 21.99 |
| PGSC0003DMT400022405 | Potato | cytosol, nucleus | 56.7 | 21.82 |
| CDY11957 | Canola | cytosol | 43.3 | 21.8 |
| HORVU6Hr1G071770.19 | Barley | cytosol | 59.82 | 21.68 |
| PGSC0003DMT400057292 | Potato | nucleus | 59.82 | 21.68 |
| Solyc07g066090.2.1 | Tomato | nucleus | 59.82 | 21.61 |
| AT1G55690.4 | Thale cress | nucleus | 59.38 | 21.28 |
| KRH62508 | Soybean | cytosol | 58.48 | 21.13 |
| VIT_19s0015g01160.t01 | Wine grape | cytosol | 58.48 | 21.09 |
| HORVU7Hr1G048880.11 | Barley | mitochondrion | 60.71 | 21.02 |
| CDY42378 | Canola | nucleus | 60.27 | 21.0 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 60.27 | 21.0 |
| KRH56402 | Soybean | cytosol | 58.04 | 20.97 |
| Solyc10g005740.1.1 | Tomato | nucleus | 57.14 | 20.71 |
| CDY50018 | Canola | vacuole | 58.04 | 20.34 |
| HORVU2Hr1G082530.1 | Barley | cytosol | 52.23 | 20.21 |
| KRH07662 | Soybean | cytosol | 55.8 | 20.19 |
| CDY51966 | Canola | cytosol | 52.23 | 19.66 |
| AT5G56160.1 | Thale cress | cytosol | 50.45 | 19.58 |
| CDY17397 | Canola | cytosol | 51.79 | 19.5 |
| CDY51073 | Canola | mitochondrion, nucleus | 40.18 | 17.61 |
| HORVU6Hr1G017570.5 | Barley | cytosol, nucleus, plastid | 58.04 | 17.45 |
| CDY36780 | Canola | plastid | 43.75 | 17.19 |
| HORVU2Hr1G111160.14 | Barley | mitochondrion | 29.46 | 16.75 |
| HORVU3Hr1G065830.17 | Barley | cytosol, mitochondrion, plastid | 47.32 | 15.84 |
| HORVU6Hr1G017580.5 | Barley | plastid | 43.75 | 15.61 |
| HORVU1Hr1G078880.9 | Barley | cytosol, nucleus | 50.0 | 15.36 |
| Bra028944.1-P | Field mustard | plastid | 43.75 | 14.08 |
| Bra038012.1-P | Field mustard | cytosol | 58.04 | 12.29 |
| HORVU5Hr1G052230.2 | Barley | cytosol | 17.86 | 11.9 |
| HORVU7Hr1G090330.11 | Barley | cytosol, nucleus, plastid | 17.41 | 11.47 |
| HORVU6Hr1G032510.1 | Barley | cytosol, nucleus, peroxisome | 17.41 | 11.34 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
| Bra002840.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G112740.3 | EnsemblPlantsGene:HORVU3Hr1G112740 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF95 | PFAM:PF00650 |
| PFAM:PF03765 | SEG:seg | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000B46EE2C |
| UniProt:A0A287MQS9 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:687055057..687056334
Molecular Weight (calculated)
26812.9 Da
IEP (calculated)
8.914
GRAVY (calculated)
-0.783
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVRRRSEST EGLFLFYEQK DRRSDVENSE DERRRLSIGG SLKKKALNAS SKLTHSLKKR GKRKAEHRAS SFTIEDVRDE EEERAVFTFQ QELLSRNLLC
101: DKQNYYHMLL RFLKARKFDT EKAIHMWAEM LQWRKEFGAD TILEDLNFEE LDEVLSYYPQ GYHGVDRQGR PVYIERLGKV DPNKLMNITT VDRYIKYHVQ
201: EFERAFLDKY QVCAYVMQVH FFGI
101: DKQNYYHMLL RFLKARKFDT EKAIHMWAEM LQWRKEFGAD TILEDLNFEE LDEVLSYYPQ GYHGVDRQGR PVYIERLGKV DPNKLMNITT VDRYIKYHVQ
201: EFERAFLDKY QVCAYVMQVH FFGI
001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.