Factsheet for HORVU5Hr1G052230.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G170000.1	Wheat	cytosol	96.43	96.72
TraesCS5D01G174400.1	Wheat	cytosol	96.13	96.42
TraesCS5B01G166800.1	Wheat	cytosol	96.13	96.42
Os09t0258000-01	Rice	cytosol	84.23	84.48
EER96447	Sorghum	cytosol	82.74	82.99
Zm00001d005118_P002	Maize	cytosol	77.08	65.74
CDY52903	Canola	cytosol	62.8	64.53
Bra038021.1-P	Field mustard	cytosol	62.5	64.22
CDY53762	Canola	cytosol	62.5	64.22
CDY42389	Canola	cytosol	61.9	64.0
Bra030831.1-P	Field mustard	cytosol	61.61	63.69
CDY10527	Canola	cytosol	61.61	63.69
AT1G55840.1	Thale cress	cytosol	61.31	63.38
HORVU6Hr1G032510.1	Barley	cytosol, nucleus, peroxisome	63.1	61.63
HORVU7Hr1G090330.11	Barley	cytosol, nucleus, plastid	61.31	60.59
HORVU1Hr1G088100.1	Barley	cytosol	10.71	22.36
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	12.8	19.2
HORVU1Hr1G091860.1	Barley	cytosol	8.93	18.4
HORVU7Hr1G037200.1	Barley	nucleus	11.61	18.22
HORVU3Hr1G112740.3	Barley	nucleus	11.9	17.86
HORVU2Hr1G111160.14	Barley	mitochondrion	20.54	17.51
HORVU2Hr1G082530.1	Barley	cytosol	24.11	13.99
HORVU6Hr1G071770.19	Barley	cytosol	25.6	13.92
HORVU7Hr1G048880.11	Barley	mitochondrion	26.79	13.91
HORVU6Hr1G017580.5	Barley	plastid	23.21	12.42
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	24.7	12.41
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	26.19	11.81
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	25.6	11.8

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EMBL:AK369647	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	UniProt:F2E0H6	EnsemblPlantsGene:HORVU5Hr1G052230	EnsemblPlants:HORVU5Hr1G052230.2	InterPro:IPR001251	InterPro:IPR036865
PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF142
SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000200796C	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E0H6]

Coordinates

chrchr5H:+:408374622..408380719

Molecular Weight (calculated)

38025.6 Da

IEP (calculated)

8.409

GRAVY (calculated)

-0.443

Length

336 amino acids

Sequence
(BLAST)

001: MAAASEESVK QFSALMEQLE EPLKTTFQNV HQGYPRGTLL RFLKAREWNV PKAYKMLMDC LNWRLQNEID SVLAKPILPA DLYRSIRDTL LVGLTGYSKQ
101: GQPVYAFGVG LSTFDRASVN YYLQSHIQMN EYRDRVVLPG ASERSGRQIN TCLKVMDMTG LKLSALNQIK MLSTITAVDD LNYPEKTETY YIVNAPYVFS
201: ACWKVVKPLL QERTKKKIKV LYGPGRDELL KVMDYASLPH FCKREGSGSG SSSDEVDCYS YDHPFHQQLY NYVKQQAARN QEDGAGPVKQ GSMHVRVPTP
301: DLEEAKIMET IQSELHSLKG GDGISRSFNR ITIEGP

Best Arabidopsis Sequence Match ( AT1G55840.1 )
(BLAST)

001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI

Arabidopsis Description

At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.