Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G088100.1 | Barley | cytosol | 39.88 | 40.37 |
| HORVU7Hr1G037200.1 | Barley | nucleus | 40.49 | 30.84 |
| HORVU3Hr1G112740.3 | Barley | nucleus | 39.26 | 28.57 |
| HORVU7Hr1G040650.2 | Barley | cytosol, nucleus, plastid | 38.65 | 28.12 |
| CDY11954 | Canola | cytosol | 21.47 | 17.95 |
| TraesCS2B01G533900.1 | Wheat | nucleus | 51.53 | 13.33 |
| TraesCS2D01G506400.1 | Wheat | nucleus | 51.53 | 13.27 |
| KXG40069 | Sorghum | nucleus | 49.69 | 12.86 |
| Os08t0341700-01 | Rice | nucleus | 49.69 | 12.72 |
| HORVU2Hr1G111160.14 | Barley | mitochondrion | 30.06 | 12.44 |
| CDY11957 | Canola | cytosol | 33.13 | 12.13 |
| GSMUA_Achr7P06190_001 | Banana | cytosol | 42.33 | 11.96 |
| HORVU7Hr1G048880.11 | Barley | mitochondrion | 46.01 | 11.59 |
| GSMUA_Achr3P11960_001 | Banana | cytosol, plastid | 42.94 | 11.48 |
| Zm00001d050131_P002 | Maize | cytosol | 44.79 | 11.42 |
| HORVU6Hr1G071770.19 | Barley | cytosol | 42.94 | 11.33 |
| PGSC0003DMT400057292 | Potato | nucleus | 42.33 | 11.16 |
| KRH45371 | Soybean | cytosol | 30.06 | 11.14 |
| Solyc10g005740.1.1 | Tomato | nucleus | 41.72 | 11.0 |
| Solyc07g066090.2.1 | Tomato | nucleus | 41.72 | 10.97 |
| KRH62508 | Soybean | cytosol | 41.1 | 10.81 |
| VIT_19s0015g01160.t01 | Wine grape | cytosol | 41.1 | 10.79 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 42.33 | 10.73 |
| HORVU2Hr1G082530.1 | Barley | cytosol | 38.04 | 10.71 |
| PGSC0003DMT400022405 | Potato | cytosol, nucleus | 38.04 | 10.65 |
| CDY42378 | Canola | nucleus | 41.1 | 10.42 |
| AT5G56160.1 | Thale cress | cytosol | 36.81 | 10.4 |
| Bra030841.1-P | Field mustard | nucleus | 38.04 | 10.35 |
| CDY50018 | Canola | vacuole | 40.49 | 10.33 |
| Bra002841.1-P | Field mustard | cytosol | 33.13 | 10.32 |
| KRH56402 | Soybean | cytosol | 39.26 | 10.32 |
| AT1G55690.4 | Thale cress | nucleus | 39.26 | 10.24 |
| KRH07662 | Soybean | cytosol | 38.65 | 10.18 |
| CDY36780 | Canola | plastid | 34.97 | 10.0 |
| HORVU6Hr1G017570.5 | Barley | cytosol, nucleus, plastid | 44.79 | 9.8 |
| CDY51966 | Canola | cytosol | 35.58 | 9.75 |
| CDY17397 | Canola | cytosol | 34.97 | 9.58 |
| HORVU6Hr1G017580.5 | Barley | plastid | 36.81 | 9.55 |
| HORVU5Hr1G052230.2 | Barley | cytosol | 18.4 | 8.93 |
| HORVU7Hr1G090330.11 | Barley | cytosol, nucleus, plastid | 18.4 | 8.82 |
| HORVU3Hr1G065830.17 | Barley | cytosol, mitochondrion, plastid | 36.2 | 8.82 |
| HORVU6Hr1G032510.1 | Barley | cytosol, nucleus, peroxisome | 18.4 | 8.72 |
| HORVU1Hr1G078880.9 | Barley | cytosol, nucleus | 38.65 | 8.64 |
| CDY51073 | Canola | mitochondrion, nucleus | 26.38 | 8.41 |
| Bra028944.1-P | Field mustard | plastid | 31.9 | 7.47 |
| Bra038012.1-P | Field mustard | cytosol | 40.49 | 6.24 |
| Bra002840.1-P | Field mustard | cytosol | 0.0 | 0.0 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G091860.1 | EnsemblPlantsGene:HORVU1Hr1G091860 | Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | Gene3D:3.80.10.10 | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR032675 | InterPro:IPR036865 | InterPro:LRR_dom_sf | PANTHER:PTHR23324 |
| PANTHER:PTHR23324:SF95 | PFAM:PF03765 | SEG:seg | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52058 |
| UniParc:UPI000B46740E | UniProt:A0A287GQZ1 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:549121071..549124945
Molecular Weight (calculated)
18947.3 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.457
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLRFLKARK FDTEKAIHMW AEMLQWRKEF GADTILEDFD FEELDEVLSY YPQGYHGVDR QGRDHTWHIW SLQHCTSLLQ HYEPNAPAIS RSESSRFSRV
101: DLSFNNITCQ VPQTLLNLNS LSFLFLGNNS LSGNLPRSIG SSLIRRDFSY NQLSGTVPSW AKD
101: DLSFNNITCQ VPQTLLNLNS LSFLFLGNNS LSGNLPRSIG SSLIRRDFSY NQLSGTVPSW AKD
001: MAETKPEIEM SEEERKIVKI SSLKKKAINA SNRFKNSFKK KGRRSSSRVM SVPIEDDIDA EDLQALDAFR QALILDELLP SKLDDLHMML RFLRARKFDI
101: EKAKQMWSDM IQWRKDFGAD TIIEDFDFEE IDEVMKHYPQ GYHGVDKEGR PVYIERLGQI DANKLLQVTT MDRYVKYHVK EFEKTFKVKF PSCSVAANKH
201: IDQSTTILDV QGVGLKNFSK SARELLQRLC KIDNENYPET LNRMFIINAG SGFRLLWSTV KSFLDPKTTA KIHVLGNKYH SKLLEVIDAS ELPEFFGGAC
301: TCEDKGGCMR SDKGPWNDPE VLKIAINREA KCSPISEDEH KHVDQGRSTS GFESLERIKK KTDEDNVYEK QIATIDKSMD MAWLAKTQKA ENFPISKGLE
401: CYVRKGAPKK GDGLLVGGVM AFVMGIVAMV RLSKDVPRKL TEAALYGNSV CYEESTKSKQ NQGQFAAPVS SSEYMLMVKR MAELEDKCMF LDLKPAHVES
501: EKEEKLQAAL NRVQVLEQEL TETKKALEEA LVSQKEILAY IEKKKKKKKL FFGF
101: EKAKQMWSDM IQWRKDFGAD TIIEDFDFEE IDEVMKHYPQ GYHGVDKEGR PVYIERLGQI DANKLLQVTT MDRYVKYHVK EFEKTFKVKF PSCSVAANKH
201: IDQSTTILDV QGVGLKNFSK SARELLQRLC KIDNENYPET LNRMFIINAG SGFRLLWSTV KSFLDPKTTA KIHVLGNKYH SKLLEVIDAS ELPEFFGGAC
301: TCEDKGGCMR SDKGPWNDPE VLKIAINREA KCSPISEDEH KHVDQGRSTS GFESLERIKK KTDEDNVYEK QIATIDKSMD MAWLAKTQKA ENFPISKGLE
401: CYVRKGAPKK GDGLLVGGVM AFVMGIVAMV RLSKDVPRKL TEAALYGNSV CYEESTKSKQ NQGQFAAPVS SSEYMLMVKR MAELEDKCMF LDLKPAHVES
501: EKEEKLQAAL NRVQVLEQEL TETKKALEEA LVSQKEILAY IEKKKKKKKL FFGF
Arabidopsis Description
SFH1SRH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V672]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.