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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030841.1-P Field mustard nucleus 93.16 100.0
CDY10540 Canola cytosol, nucleus, plastid 97.51 97.51
AT1G55690.4 Thale cress nucleus 81.49 83.84
CDY50018 Canola vacuole 80.4 80.91
CDY51073 Canola mitochondrion, nucleus 60.81 76.52
Zm00001d039981_P001 Maize cytosol 13.84 72.36
Zm00001d031251_P001 Maize cytosol, mitochondrion 13.84 68.99
HORVU1Hr1G088100.1 Barley cytosol 16.49 65.84
VIT_19s0015g01160.t01 Wine grape cytosol 63.45 65.7
KRH62508 Soybean cytosol 60.03 62.26
HORVU7Hr1G037200.1 Barley nucleus 20.68 62.15
Zm00001d012531_P001 Maize mitochondrion 12.6 61.83
KRH45371 Soybean cytosol 42.3 61.82
KRH56402 Soybean cytosol 59.41 61.61
Solyc07g066090.2.1 Tomato nucleus 58.32 60.48
HORVU3Hr1G112740.3 Barley nucleus 21.0 60.27
PGSC0003DMT400057292 Potato nucleus 57.39 59.71
HORVU7Hr1G040650.2 Barley cytosol, nucleus, plastid 20.68 59.38
KRH07662 Soybean cytosol 56.14 58.32
Solyc10g005740.1.1 Tomato nucleus 55.68 57.93
CDY11957 Canola cytosol 39.5 57.08
GSMUA_Achr4P09770_001 Banana cytosol 39.5 55.7
Zm00001d043774_P001 Maize cytosol 7.31 55.29
CDX99587 Canola cytosol, mitochondrion 24.11 54.77
CDY11954 Canola cytosol 16.49 54.36
CDY15888 Canola cytosol 23.64 53.71
PGSC0003DMT400022405 Potato cytosol, nucleus 48.52 53.61
GSMUA_Achr7P06190_001 Banana cytosol 46.35 51.65
CDY17397 Canola cytosol 47.28 51.09
CDY51966 Canola cytosol 47.28 51.09
GSMUA_Achr3P04130_001 Banana nucleus 49.3 50.88
GSMUA_Achr3P11960_001 Banana cytosol, plastid 47.59 50.16
Os02t0721800-01 Rice cytosol 46.97 49.35
GSMUA_Achr5P04200_001 Banana plastid 47.74 49.12
TraesCS7D01G238000.2 Wheat cytosol 46.03 48.93
Os08t0341700-01 Rice nucleus 48.21 48.67
CDY36780 Canola plastid 43.08 48.6
KXG40069 Sorghum nucleus 47.59 48.57
OQU80990 Sorghum cytosol 45.72 48.43
Zm00001d017876_P018 Maize cytosol 46.35 48.3
Zm00001d051674_P037 Maize cytosol 45.88 48.2
TraesCS2B01G533900.1 Wheat nucleus 47.12 48.1
HORVU6Hr1G071770.19 Barley cytosol 46.19 48.06
TraesCS2D01G506400.1 Wheat nucleus 47.28 48.03
TraesCS6D01G265200.1 Wheat cytosol 46.19 47.98
KXG30865 Sorghum cytosol 46.03 47.97
Os08t0497300-01 Rice cytosol, plastid 44.95 47.85
TraesCS6B01G313500.1 Wheat cytosol 46.03 47.82
TraesCS6A01G284800.1 Wheat cytosol 46.03 47.74
Zm00001d014589_P001 Maize cytosol 7.15 47.42
Zm00001d045670_P001 Maize cytosol 13.84 47.34
Zm00001d005995_P003 Maize nucleus 43.7 46.91
GSMUA_Achr8P24430_001 Banana endoplasmic reticulum 48.06 46.82
Os09t0481100-01 Rice nucleus 44.17 46.48
EER96946 Sorghum cytosol, nucleus, plastid 43.23 46.41
HORVU7Hr1G048880.11 Barley mitochondrion 46.19 45.9
Zm00001d035770_P002 Maize cytosol, endoplasmic reticulum 20.84 45.12
TraesCS7A01G240000.3 Wheat endoplasmic reticulum, plastid 46.5 44.56
TraesCS7B01G135600.2 Wheat plastid 46.19 44.53
Zm00001d031316_P020 Maize cytosol 44.32 44.19
CDY12126 Canola cytosol 36.7 44.11
CDX90317 Canola cytosol 36.39 43.58
Zm00001d045718_P001 Maize cytosol 16.95 43.08
CDX82040 Canola cytosol 40.12 42.79
CDY12125 Canola cytosol 40.9 42.69
Zm00001d050131_P002 Maize cytosol 42.15 42.41
CDX90316 Canola cytosol 40.75 42.39
CDY52084 Canola cytosol 38.57 42.25
CDY15887 Canola cytosol 35.15 41.17
CDY13810 Canola cytosol 40.44 41.14
HORVU1Hr1G091860.1 Barley cytosol 10.42 41.1
CDX99586 Canola cytosol 35.15 41.09
Zm00001d008240_P001 Maize cytosol, extracellular, mitochondrion, nucleus 12.6 40.91
CDX68133 Canola cytosol 38.57 40.79
CDX85889 Canola cytosol 38.41 40.69
CDX75444 Canola cytosol 33.75 40.64
CDY39363 Canola cytosol 37.33 40.54
CDX69071 Canola cytosol 33.59 40.45
CDX77382 Canola cytosol 38.57 40.06
Zm00001d052840_P016 Maize plastid 45.1 40.0
CDX89709 Canola cytosol, mitochondrion 28.15 39.78
CDY29415 Canola nucleus 37.95 39.67
CDY45318 Canola cytosol, plastid 30.79 39.6
CDY17469 Canola cytosol 33.59 37.83
CDY17730 Canola cytosol 23.64 37.81
Zm00001d037983_P001 Maize cytosol 13.69 37.29
CDX77773 Canola cytosol 23.48 37.1
CDX76291 Canola cytosol 33.59 36.49
Zm00001d010393_P001 Maize plastid 20.37 35.99
CDX69225 Canola mitochondrion 30.48 32.29
Zm00001d047488_P001 Maize nucleus 6.84 27.5
CDY53762 Canola cytosol 13.84 27.22
CDY52903 Canola cytosol 13.69 26.91
CDY28908 Canola cytosol 13.53 26.28
CDY10527 Canola cytosol 13.22 26.15
CDY42389 Canola cytosol 13.22 26.15
CDY40544 Canola cytosol 13.37 26.06
CDY25949 Canola cytosol 13.37 25.83
CDY41066 Canola cytosol 13.37 25.83
CDX77792 Canola cytosol 13.37 25.75
CDY17710 Canola cytosol 13.22 25.45
Zm00001d035370_P003 Maize plastid 12.13 19.12
CDY02262 Canola cytosol, plastid 32.97 14.71
Zm00001d005778_P001 Maize plastid 6.38 14.59
CDY36781 Canola extracellular 0.16 0.6
Protein Annotations
Gene3D:1.10.8.20Gene3D:3.40.525.10MapMan:35.1UniProt:A0A078I007EnsemblPlants:CDY42378ProteinID:CDY42378
ProteinID:CDY42378.1InterPro:CRAL-TRIO_domInterPro:CRAL-TRIO_dom_sfInterPro:CRAL/TRIO_N_domInterPro:CRAL/TRIO_N_dom_sfEnsemblPlantsGene:GSBRNA2T00074660001
InterPro:IPR001251InterPro:IPR036865PFAM:PF00650PFAM:PF03765PFscan:PS50191PANTHER:PTHR23324
PANTHER:PTHR23324:SF84SMART:SM00516SMART:SM01100SUPFAM:SSF46938SUPFAM:SSF52087UniParc:UPI0004EE328D
SEG:seg:::::
Description
BnaA08g00360DBnaA08g00360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I007]
Coordinates
chrLK032523:-:39999..44372
Molecular Weight (calculated)
74223.2 Da
IEP (calculated)
8.509
GRAVY (calculated)
-0.575
Length
643 amino acids
Sequence
(BLAST)
001: MSSLSALHQP ESFPFDRDMS GVEENGALDE IRERRSDFEI SEEDERRRSK IGSLKKKAIN ASTKFTHSLK KRGKKKIDYR FPPVVSIEDV RDEKEESVVL
101: EFRRNLLERD LLPPRHDEYH TLLRFLKARD FNIEKTIQMW EDMLRWRKEY GTDTILEDFE FQELEEVLQY YPQGYHGVDK EGRPVYIERL GKAHPSKLMR
201: ITTIDRYLKY HVQEFERALL EKFPACSIAA KRRIFSTTTI LDVQGLGMKN FSQTAVNLVA AMSKIDNSYY PETLHRMFIV NAGTGFKKML WPAAQKFLDA
301: KTIAKIHVLD PRSLSKLHEV IDSSQLPDFL GGSCSCFGEG GCLRSNKGPW NDPEIMKLLY HGESSLFRQI SRKLSDPQNS SSSYISIHPS KAMQAESSAA
401: ESESCSDVPT SLTGRMCSAS AHVNPVSEDA RASDVNGYYS CDDKFDIPNI ATNRKGQERQ SHYQMIELNQ ATLGLKRETS PPGTPIIRWL HDLRGTMDII
501: RTENVAKRIL ALLLKLAAVF RCIPFQILRR KNTITPSIPT EDENRSRLIS APTETTMKDK IRPCLERIQE LEKVYEEMRN KPVEIPVEKE RMLMDSLDRI
601: KSVEFDLVKT KRVLHATVVK QMEITEMLES LRESQLHRRR LFC
Best Arabidopsis Sequence Match ( AT1G55690.5 )
(BLAST)
001: MSGVEEISTL DEFRERRSDF EISEDERRRS KIGNLKKKAI NASTKFTHSL KKRGKRKIDY RVPAVSIEDV RDEKEESVVL EFRRKLLERD LLPPRHDEYH
101: TLLRFLKARD LNIEKTTQLW EEMLRWRKEY GTDTILEDFD FEELEEVLQY YPQGYHGVDK EGRPVYIERL GKAHPSKLMR ITTIDRYLKY HVQEFERALQ
201: EKFPACSIAA KRRICSTTTI LDVQGLGIKN FTPTAANLVA AMSKIDNSYY PETLHRMYIV NAGTGFKKML WPAAQKFLDA KTIAKIHVLE PKSLFKLHEV
301: IDSSQLPEFL GGSCSCFGDG GGCLRSNKGP WNDPEIMKLI YHGESSLFRQ STRKLTDPHY SSSYISIHPS KAIQAETSAA ESISCSDVPS SPTGRLCSAS
401: SHVNSAYEEA RASDVNGYYS CDDKFAIPDK ATNRKGQERQ SQYQMRELNA TTIGLKCETS SPGAPIIRWL HDLRVMIDKI KCENLAKRLL SLMLKLAAVF
501: RYTPLELLRS QTTVSPSSLT EDDSRCSLIS PPPREPTMKD RILPCLERIQ KLEKSYEDIR NKPVAIPVEK ERMLMDSLDR IKSVEFDLDK TKRLLHATVM
601: KQMEITEMLQ NIRDSQLHRR RRLFC
Arabidopsis Description
SFH13Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Source:UniProtKB/Swiss-Prot;Acc:Q501H5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.