Factsheet for Zm00001d005995_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96946	Sorghum	cytosol, nucleus, plastid	92.15	92.15
Zm00001d039981_P001	Maize	cytosol	18.7	91.06
Zm00001d031251_P001	Maize	cytosol, mitochondrion	16.36	75.97
Os09t0481100-01	Rice	nucleus	75.13	73.65
Zm00001d014589_P001	Maize	cytosol	11.19	69.07
Zm00001d045670_P001	Maize	cytosol	20.53	65.43
Zm00001d031316_P020	Maize	cytosol	68.28	63.41
Zm00001d012531_P001	Maize	mitochondrion	13.86	63.36
Zm00001d045718_P001	Maize	cytosol	26.71	63.24
Zm00001d043774_P001	Maize	cytosol	8.85	62.35
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	19.2	58.08
GSMUA_Achr4P09770_001	Banana	cytosol	43.24	56.8
Zm00001d052840_P016	Maize	plastid	67.78	56.0
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	27.71	55.89
Zm00001d017876_P018	Maize	cytosol	53.42	51.86
Zm00001d051674_P037	Maize	cytosol	52.92	51.8
Zm00001d010393_P001	Maize	plastid	31.22	51.37
GSMUA_Achr3P04130_001	Banana	nucleus	52.75	50.72
GSMUA_Achr5P04200_001	Banana	plastid	50.92	48.8
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	52.09	47.27
KRH45371	Soybean	cytosol	34.56	47.05
VIT_19s0015g01160.t01	Wine grape	cytosol	47.75	46.05
Zm00001d037983_P001	Maize	cytosol	18.03	45.76
KRH56402	Soybean	cytosol	46.74	45.16
KRH62508	Soybean	cytosol	46.74	45.16
CDY11957	Canola	cytosol	33.22	44.72
CDY11954	Canola	cytosol	14.52	44.62
KRH07662	Soybean	cytosol	46.08	44.59
Zm00001d019582_P001	Maize	cytosol	23.54	44.06
CDY10540	Canola	cytosol, nucleus, plastid	47.25	44.01
AT1G55690.4	Thale cress	nucleus	45.91	44.0
Solyc07g066090.2.1	Tomato	nucleus	45.41	43.87
CDY42378	Canola	nucleus	46.91	43.7
PGSC0003DMT400057292	Potato	nucleus	45.08	43.69
Zm00001d015174_P005	Maize	cytosol	47.25	43.27
CDY50018	Canola	vacuole	45.41	42.57
Zm00001d009439_P004	Maize	cytosol	43.57	42.23
Zm00001d053994_P008	Maize	cytosol, mitochondrion	46.91	42.19
Bra030841.1-P	Field mustard	nucleus	42.07	42.07
Zm00001d050131_P002	Maize	cytosol	44.74	41.94
Zm00001d038880_P001	Maize	cytosol	42.74	41.42
Solyc10g005740.1.1	Tomato	nucleus	41.57	40.29
CDY51073	Canola	mitochondrion, nucleus	34.06	39.92
Zm00001d016601_P006	Maize	cytosol	40.07	39.67
Zm00001d043733_P002	Maize	mitochondrion	35.89	39.16
Zm00001d011663_P003	Maize	cytosol	39.9	38.93
AT5G56160.1	Thale cress	cytosol	37.23	38.65
CDY51966	Canola	cytosol	37.56	37.82
Bra002841.1-P	Field mustard	cytosol	32.89	37.67
CDY17397	Canola	cytosol	37.4	37.65
PGSC0003DMT400022405	Potato	cytosol, nucleus	36.56	37.63
CDY36780	Canola	plastid	35.39	37.19
Zm00001d047488_P001	Maize	nucleus	9.68	36.25
Zm00001d015175_P002	Maize	plastid	38.06	35.35
Zm00001d035370_P003	Maize	plastid	17.53	25.74
Bra028944.1-P	Field mustard	plastid	29.88	25.72
Bra038012.1-P	Field mustard	cytosol	45.24	25.61
Zm00001d015785_P001	Maize	extracellular	13.36	24.46
Zm00001d053333_P001	Maize	cytosol	4.84	23.77
Zm00001d015625_P001	Maize	cytosol	5.01	23.08
Zm00001d024390_P001	Maize	cytosol	4.84	22.66
Zm00001d046538_P003	Maize	cytosol	13.86	21.12
Zm00001d019834_P003	Maize	cytosol, extracellular, plastid	3.51	20.59
Zm00001d005118_P002	Maize	cytosol	13.36	20.3
Zm00001d053648_P005	Maize	cytosol, endoplasmic reticulum, plastid	11.19	19.42
Zm00001d005778_P001	Maize	plastid	8.51	18.15
Zm00001d050144_P001	Maize	cytosol	5.01	17.34
Zm00001d051318_P001	Maize	cytosol	4.51	14.21
Zm00001d023995_P002	Maize	extracellular, golgi, plastid	5.34	13.56
Zm00001d020031_P001	Maize	cytosol	2.34	8.92
Bra002840.1-P	Field mustard	cytosol	0.17	1.3
CDY36781	Canola	extracellular	0.17	0.6

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100285123	Gene3D:3.40.525.10	MapMan:35.1	EMBL:BT067468	UniProt:C0PGP9
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251
InterPro:IPR036865	ProteinID:ONM22508.1	ProteinID:ONM22510.1	ProteinID:ONM22511.1	PFAM:PF00650	PFAM:PF03765
PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF65	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000195C9FE	EnsemblPlantsGene:Zm00001d005995	EnsemblPlants:Zm00001d005995_P003	EnsemblPlants:Zm00001d005995_T003
SEG:seg	:	:	:	:	:

Description

Phosphatidylinositol/phosphatidylcholine transfer protein SFH13

Coordinates

chr2:+:194924227..194930662

Molecular Weight (calculated)

68320.4 Da

IEP (calculated)

7.076

GRAVY (calculated)

-0.538

Length

599 amino acids

Sequence
(BLAST)

001: MSVSHADEHE ISLCDPSSED DRRRRKIGSL PLKAIHALRK KRARRRVTDF RFPAAISIED VRDAEEERAV AAFRDRLAAH RLLPDKHDDY HMMLRFLKAR
101: KFDSDKAMQM WSEMLRWRKE FGTDTILEDF EFDELNDVLH YYPQGYHGVD REGRPVYIER LGKVDPNKLM QITSVDRYIK YHVQEFERAF RERFPACTLS
201: AKRHIDSTTT ILDVHGVGFK NFSKTARELV QRMQRIDSDY YPETLHQMYV VNAGSGFKLI WNSVKGFLDP KTSSKIHVLG SNYQSRLIEV IDSSELPKFL
301: GGSCTCSEKG GCLRSNRGPW NDPVIMKLIH SMEGGSTREI KQVSDGDERS GSSLRAENLK GMLSDISNAE SESDVDDVGL TVVQKSTDHS LLTPVHEEVK
401: GSDTSIFCSS SSKHLLDTTP GAPQATPQME MPIQLTCRKY FPTFGWLNNL GNAYISLHGT SAGRTLENLA TGLITLLIRI SSFFHLSVYR QERFIETVQP
501: CAAAQEPEPQ REEDMSACLR RLKKLESLCD HLMSKPPDMP KEKELVLMQS FDRIKSLEAE LEATKNALQA AVEKQMELVE TVEALQHQST SVRRRFCCS

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.