CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45371	Soybean	cytosol	58.32	82.05
Zm00001d039981_P001	Maize	cytosol	14.05	70.73
KRH62508	Soybean	cytosol	70.6	70.48
KRH56402	Soybean	cytosol	69.95	69.84
VIT_19s0015g01160.t01	Wine grape	cytosol	67.69	67.47
Zm00001d031251_P001	Maize	cytosol, mitochondrion	14.05	67.44
HORVU1Hr1G088100.1	Barley	cytosol	16.48	63.35
Zm00001d012531_P001	Maize	mitochondrion	12.92	61.07
PGSC0003DMT400057292	Potato	nucleus	59.29	59.39
Solyc07g066090.2.1	Tomato	nucleus	58.8	58.71
HORVU7Hr1G037200.1	Barley	nucleus	19.87	57.48
AT1G55690.4	Thale cress	nucleus	57.84	57.28
CDY42378	Canola	nucleus	58.32	56.14
CDY10540	Canola	cytosol, nucleus, plastid	58.16	55.99
Solyc10g005740.1.1	Tomato	nucleus	55.9	55.99
HORVU3Hr1G112740.3	Barley	nucleus	20.19	55.8
CDY50018	Canola	vacuole	57.19	55.4
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	20.03	55.36
Bra030841.1-P	Field mustard	nucleus	53.47	55.26
CDY51073	Canola	mitochondrion, nucleus	45.23	54.79
GSMUA_Achr4P09770_001	Banana	cytosol	39.58	53.73
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	52.02	52.79
PGSC0003DMT400022405	Potato	cytosol, nucleus	49.6	52.75
GSMUA_Achr7P06190_001	Banana	cytosol	49.11	52.69
GSMUA_Achr3P04130_001	Banana	nucleus	52.5	52.17
Zm00001d043774_P001	Maize	cytosol	6.95	50.59
GSMUA_Achr5P04200_001	Banana	plastid	50.4	49.92
KRG99756	Soybean	cytosol	30.69	49.35
KXG40069	Sorghum	nucleus	49.6	48.73
TraesCS2B01G533900.1	Wheat	nucleus	49.6	48.73
TraesCS2D01G506400.1	Wheat	nucleus	49.6	48.5
TraesCS7D01G238000.2	Wheat	cytosol	47.33	48.43
Os08t0341700-01	Rice	nucleus	49.76	48.35
Os08t0497300-01	Rice	cytosol, plastid	46.85	48.01
Os02t0721800-01	Rice	cytosol	47.17	47.71
OQU80990	Sorghum	cytosol	46.37	47.28
KXG30865	Sorghum	cytosol	47.01	47.16
Zm00001d051674_P037	Maize	cytosol	46.53	47.06
Zm00001d017876_P018	Maize	cytosol	46.85	47.0
HORVU6Hr1G071770.19	Barley	cytosol	46.85	46.93
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	49.92	46.82
Os09t0481100-01	Rice	nucleus	46.04	46.64
TraesCS6D01G265200.1	Wheat	cytosol	46.37	46.37
TraesCS6A01G284800.1	Wheat	cytosol	46.37	46.29
EER96946	Sorghum	cytosol, nucleus, plastid	44.75	46.24
TraesCS6B01G313500.1	Wheat	cytosol	46.2	46.2
Zm00001d005995_P003	Maize	nucleus	44.59	46.08
KRH28724	Soybean	plastid	35.38	45.34
KRH76738	Soybean	plastid	35.06	45.11
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	21.49	44.78
KRH05860	Soybean	cytosol	45.07	44.64
Zm00001d014589_P001	Maize	cytosol	6.95	44.33
Zm00001d045718_P001	Maize	cytosol	18.09	44.27
KRH24439	Soybean	plastid	23.42	44.21
HORVU7Hr1G048880.11	Barley	mitochondrion	46.2	44.2
Zm00001d045670_P001	Maize	cytosol	13.41	44.15
KRH15161	Soybean	cytosol	44.75	43.97
KRG99773	Soybean	cytosol, nucleus, plastid	42.16	43.94
TraesCS7B01G135600.2	Wheat	plastid	47.01	43.63
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	47.17	43.52
KRH46724	Soybean	cytosol, nucleus, plastid	41.68	43.43
KRG99658	Soybean	cytosol, nucleus, plastid	5.33	43.42
KRG99659	Soybean	cytosol, nucleus, plastid	5.33	43.42
Zm00001d031316_P020	Maize	cytosol	45.23	43.41
Zm00001d050131_P002	Maize	cytosol	44.26	42.88
KRH51809	Soybean	nucleus	40.87	42.74
KRH61132	Soybean	cytosol	40.39	42.23
KRH29416	Soybean	cytosol	42.81	42.13
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	13.41	41.92
KRH60804	Soybean	cytosol	42.0	41.67
KRH24438	Soybean	cytosol	42.33	41.65
KRH51503	Soybean	cytosol	37.64	40.66
KRH60806	Soybean	cytosol	37.0	40.03
KRH08168	Soybean	plastid	35.86	40.0
KRH51499	Soybean	cytosol	41.36	39.94
Zm00001d052840_P016	Maize	plastid	46.2	39.45
KRH69861	Soybean	plastid	34.9	38.92
HORVU1Hr1G091860.1	Barley	cytosol	10.18	38.65
KRH29420	Soybean	cytosol, nucleus, plastid	35.06	38.54
Zm00001d010393_P001	Maize	plastid	22.13	37.64
KRH77370	Soybean	cytosol	26.82	35.85
KRH28067	Soybean	cytosol	25.85	34.78
Zm00001d037983_P001	Maize	cytosol	12.92	33.9
Bra038012.1-P	Field mustard	cytosol	57.67	33.74
Zm00001d047488_P001	Maize	nucleus	8.24	31.88
KRH01941	Soybean	cytosol	13.57	25.93
KRH51210	Soybean	cytosol	13.57	25.85
KRH11617	Soybean	cytosol	13.73	25.84
KRH46410	Soybean	cytosol	13.89	25.44
KRH36621	Soybean	cytosol	13.41	25.23
KRH65859	Soybean	cytosol	5.82	25.17
KRG82898	Soybean	cytosol	7.59	25.0
KRH14208	Soybean	cytosol	12.92	24.84
KRG99755	Soybean	endoplasmic reticulum	7.75	24.49
KRH75081	Soybean	extracellular, mitochondrion	4.68	23.58
KRH46406	Soybean	cytosol	9.85	23.55
KRG98457	Soybean	cytosol	14.22	21.46
KRH73923	Soybean	cytosol	7.11	20.95
Zm00001d035370_P003	Maize	plastid	13.57	20.59
KRH46400	Soybean	cytosol	8.89	20.45
Zm00001d005778_P001	Maize	plastid	7.92	17.44
KRG82897	Soybean	cytosol	2.26	12.84

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100776629	Gene3D:3.40.525.10	MapMan:35.1	EMBL:ACUP02010073	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_16G102400	UniProt:I1MML5
InterPro:IPR001251	InterPro:IPR036865	EnsemblPlants:KRH07662	ProteinID:KRH07662	ProteinID:KRH07662.1	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF84	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00023D7708	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr16:-:20761432..20768339

Molecular Weight (calculated)

71201.9 Da

IEP (calculated)

6.945

GRAVY (calculated)

-0.509

Length

619 amino acids

Sequence
(BLAST)

001: MSGVVEEGGV ELVENSEEER RRSRIGSLKK KAISASSRFT HSLKKRGKRK IDFRVPIEDV RDAEEEFAVQ ELRQRLLLRD LVPTRHDDYH AFLRFLKARD
101: FNIEKTIQMW EEMLTWRKEY GTDAILQDFE FEELEEVLQH YPQGYHGVDK EGRPVYIERL GKAHPSRLMR ITTIDRYLKY HVQEFERALQ EKFPACTIAA
201: KRRISSTTTV LDVQGLGMKN FSPTAASLLA AISKIDNSYY PETLHRMYII NAGPGFKRML WPAAQKFLDA KTIAKIQVLE PKSLCKLLDI IDSSQLPDFL
301: GGTCTCPGEG GCLRSSKGPW NDPDIMKMVH SVEATFERQI ARMSNEQQNL DSFWICPQKG QCSDTSTAES GSDLDDSFSS IGQSRFTFPR LAAVHEEVRV
401: SDNYYSCDDS APAAEKVLES DEFHITQEQS LQNDDTGNIA CMENSTGTSV NNWFSFVKEK VEKTNLLYVS RVVIYFMERL VMFFRSLRLE FWRTQNNIYP
501: SVAMEHNNNP AAASEILSER DHILRCMQRL ERLEKTFGEL SHKPAGIPLE KEHMLTNSLD RIKSVEFDLE KTKRVLHATV MKQLEIAELL ENLQASKSQV
601: NCISQRRLFR RKIQVSATS

Best Arabidopsis Sequence Match ( AT1G55690.1 )
(BLAST)

001: MSGVEEISTL DEFRERRSDF EISEDERRRS KIGNLKKKAI NASTKFTHSL KKRGKRKIDY RVPAVSIEDV RDEKEESVVL EFRRKLLERD LLPPRHDEYH
101: TLLRFLKARD LNIEKTTQLW EEMLRWRKEY GTDTILEDFD FEELEEVLQY YPQGYHGVDK EGRPVYIERL GKAHPSKLMR ITTIDRYLKY HVQEFERALQ
201: EKFPACSIAA KRRICSTTTI LDVQGLGIKN FTPTAANLVA AMSKIDNSYY PETLHRMYIV NAGTGFKKML WPAAQKFLDA KTIAKIHVLE PKSLFKLHEV
301: IDSSQLPEFL GGSCSCFGDG GGCLRSNKGP WNDPEIMKLI YHGESSLFRQ STRKLTDPHY SSSYISIHPS KAIQAETSAA ESISCSDVPS SPTGRLCSAS
401: SHVNSAYEEA RASDVNGYYS CDDKFAIPDK ATNRKGQERQ SQYQMRELNA TTIGLKCETS SPGAPIIRWL HDLRVMIDKI KCENLAKRLL SLMLKLAAVF
501: RYTPLELLRS QTTVSPSSLT EDDSRCSLIS PPPREPTMKD RILPCLERIQ KLEKSYEDIR NKPVAIPVEK ERMLMDSLDR IKSVEFDLDK TKRLLHATVM
601: KQMEITEMLQ NIRDSQLHRR RRLFC

Arabidopsis Description

SFH13Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Source:UniProtKB/Swiss-Prot;Acc:Q501H5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.