CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60806	Soybean	cytosol	93.54	93.71
KRH29420	Soybean	cytosol, nucleus, plastid	73.3	74.6
KRH24439	Soybean	plastid	39.62	69.21
AT2G21540.2	Thale cress	cytosol, nucleus, vacuole	63.7	66.61
CDY15887	Canola	cytosol	62.48	65.21
CDX99586	Canola	cytosol	62.48	65.09
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	53.93	63.32
KRH28724	Soybean	plastid	52.36	62.11
KRH76738	Soybean	plastid	52.01	61.95
CDY12126	Canola	cytosol	57.42	61.5
PGSC0003DMT400043532	Potato	cytosol	59.69	61.4
Bra010699.1-P	Field mustard	cytosol	57.07	60.89
CDX90317	Canola	cytosol	56.89	60.71
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	60.73	60.63
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	60.21	60.1
CDX75444	Canola	cytosol	55.85	59.93
AT4G39180.1	Thale cress	cytosol	57.77	59.75
Solyc10g053900.1.1	Tomato	cytosol, plastid	59.16	59.58
Bra034638.1-P	Field mustard	cytosol	56.54	59.56
CDX69071	Canola	cytosol	55.5	59.55
KRH69861	Soybean	plastid	57.59	59.46
KRH08168	Soybean	plastid	57.42	59.28
AT4G34580.2	Thale cress	cytosol	57.24	59.21
PGSC0003DMT400021690	Potato	nucleus	61.26	58.11
Solyc11g040280.1.1	Tomato	cytosol	60.38	57.86
CDY45318	Canola	cytosol, plastid	50.44	57.8
Bra011544.1-P	Field mustard	cytosol, plastid	49.39	57.17
CDY17469	Canola	cytosol	56.89	57.09
Bra017663.1-P	Field mustard	cytosol, plastid	44.85	56.36
CDX89709	Canola	cytosol, mitochondrion	43.98	55.38
CDX76291	Canola	cytosol	56.89	55.07
GSMUA_Achr6P03210_001	Banana	cytosol	57.07	55.05
GSMUA_Achr5P23630_001	Banana	cytosol	57.59	54.82
AT2G16380.1	Thale cress	cytosol	51.13	53.56
TraesCS2A01G327200.2	Wheat	nucleus	54.45	52.79
TraesCS2D01G335700.2	Wheat	nucleus	54.1	52.45
TraesCS2B01G354800.2	Wheat	nucleus	53.93	52.28
Os10t0122600-01	Rice	cytosol, nucleus, plastid	54.45	52.17
Os02t0440900-00	Rice	cytosol	54.45	52.17
HORVU2Hr1G082530.1	Barley	cytosol	52.36	51.81
OQU84321	Sorghum	cytosol	50.26	51.06
OQU85018	Sorghum	nucleus	54.62	51.06
Zm00001d016601_P006	Maize	cytosol	53.75	50.91
KRH29416	Soybean	cytosol	55.67	50.72
KRH60804	Soybean	cytosol	55.15	50.64
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	58.29	50.61
KRH24438	Soybean	cytosol	55.32	50.4
KRH51809	Soybean	nucleus	51.48	49.83
KRH61132	Soybean	cytosol	50.79	49.16
KRG99756	Soybean	cytosol	32.81	48.83
KRH51499	Soybean	cytosol	54.62	48.83
KRH05860	Soybean	cytosol	53.05	48.64
KRH15161	Soybean	cytosol	53.05	48.25
TraesCS6B01G125700.1	Wheat	plastid	51.48	47.97
TraesCS6A01G097200.1	Wheat	plastid	51.13	47.8
TraesCS6D01G085200.1	Wheat	plastid	50.79	47.32
Os02t0133200-01	Rice	plasma membrane	52.01	47.15
HORVU6Hr1G017580.5	Barley	plastid	51.31	46.82
Zm00001d015175_P002	Maize	plastid	51.66	45.89
KRH45371	Soybean	cytosol	31.76	41.36
KRH46724	Soybean	cytosol, nucleus, plastid	42.58	41.08
KRG99773	Soybean	cytosol, nucleus, plastid	42.58	41.08
KRH62508	Soybean	cytosol	41.01	37.9
KRH77370	Soybean	cytosol	30.54	37.8
KRH07662	Soybean	cytosol	40.66	37.64
KRH56402	Soybean	cytosol	40.49	37.42
KRH28067	Soybean	cytosol	30.02	37.39
KRG99658	Soybean	cytosol, nucleus, plastid	4.54	34.21
KRG99659	Soybean	cytosol, nucleus, plastid	4.54	34.21
KRH01941	Soybean	cytosol	15.53	27.47
KRH51210	Soybean	cytosol	15.53	27.38
KRH36621	Soybean	cytosol	15.36	26.75
KRH11617	Soybean	cytosol	15.18	26.44
KRH73923	Soybean	cytosol	9.25	25.24
KRH14208	Soybean	cytosol	13.79	24.53
KRH65859	Soybean	cytosol	5.93	23.78
KRH46410	Soybean	cytosol	13.96	23.67
KRG82898	Soybean	cytosol	7.68	23.4
KRH46406	Soybean	cytosol	10.3	22.78
KRH75081	Soybean	extracellular, mitochondrion	4.89	22.76
KRH46400	Soybean	cytosol	9.77	20.82
CDY02262	Canola	cytosol, plastid	51.31	20.4
Bra013077.1-P	Field mustard	cytosol, plastid	51.31	20.15
KRG99755	Soybean	endoplasmic reticulum	6.63	19.39
KRG98457	Soybean	cytosol	13.79	19.27
KRG82897	Soybean	cytosol	3.14	16.51

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100798374	Gene3D:3.40.525.10	MapMan:35.1	EMBL:ACUP02003379	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_06G010500	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	UniProt:I1K751	InterPro:IPR001251	InterPro:IPR036865	EnsemblPlants:KRH51503
ProteinID:KRH51503	ProteinID:KRH51503.1	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF144	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
TMHMM:TMhelix	UniParc:UPI0002339A39	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:819285..822922

Molecular Weight (calculated)

65109.9 Da

IEP (calculated)

8.772

GRAVY (calculated)

-0.489

Length

573 amino acids

Sequence
(BLAST)

001: MTDIMSAPVD PPMKLGHEIE YSEDERKKKL GSFKKVAISA SSKFKHSFAK RGRKHSRVMS LSIEDDLDAE ELQAVDAFRQ ALILEELLPS KHDDHHMMLR
101: FLRARKFDIE KTKQMWTDML KWRQEFGADT IMEDFEFNEL EEVLKYYPQG HHGIDKDGRP VYIEKLGQVD STKLMQVTTM ERYLKYHVKE FERTFAVKLP
201: ACSIAAKKHI DQSTTILDVQ GVGLKSLNKA ARDLLQRLQK IDGDNYPESL NRMFIINAGS GFRLLWNTIK SFLDPKTTSK IHVLGNKYQS KLLEIIDASE
301: LPEFLGGTCT CADKGGCMLS DKGPWNDPDI LKMVHNGEGK CKRKTLSGIE EKRIIEDGTA NQNLGNKESF PERYDVDVQC LSPKKQCTVY KYDAFVPVLG
401: KPVDSSWNTL TQKDKDALSK GADCFPSKTC DGYSNHFVGG IMAIVMGIVT MIRMTRNMPR KITEAALYGS SGYYDGTMMK AATFSCNDYM AMMKRMAELE
501: EKVTILSMKP VIPPEKEEVL NNALGRVTTI EQDLVATKKA LDDALARQVE LQAQIDKKKK KKNKLFRFRC FAA

Best Arabidopsis Sequence Match ( AT2G21540.1 )
(BLAST)

001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF

Arabidopsis Description

SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [vacuole,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.