Factsheet for AT2G16380.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89709	Canola	cytosol, mitochondrion	67.82	81.54
AT4G34580.2	Thale cress	cytosol	71.85	70.94
AT2G21540.2	Thale cress	cytosol, nucleus, vacuole	56.31	56.2
KRH24439	Soybean	plastid	32.54	54.27
AT4G39180.1	Thale cress	cytosol	54.66	53.97
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	54.3	51.74
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	53.93	51.39
KRH29420	Soybean	cytosol, nucleus, plastid	52.83	51.33
KRH51503	Soybean	cytosol	53.56	51.13
KRH60806	Soybean	cytosol	52.83	50.52
PGSC0003DMT400043532	Potato	cytosol	51.37	50.45
AT4G36490.1	Thale cress	plastid	49.54	49.91
Solyc10g053900.1.1	Tomato	cytosol, plastid	51.74	49.74
AT2G18180.1	Thale cress	plastid	49.91	48.92
PGSC0003DMT400021690	Potato	nucleus	53.75	48.68
Solyc11g040280.1.1	Tomato	cytosol	52.83	48.33
GSMUA_Achr5P23630_001	Banana	cytosol	52.47	47.67
GSMUA_Achr6P03210_001	Banana	cytosol	51.74	47.64
TraesCS2D01G335700.2	Wheat	nucleus	51.37	47.55
TraesCS2A01G327200.2	Wheat	nucleus	51.19	47.38
TraesCS2B01G354800.2	Wheat	nucleus	51.19	47.38
HORVU2Hr1G082530.1	Barley	cytosol	50.09	47.32
Os02t0440900-00	Rice	cytosol	51.37	46.99
OQU84321	Sorghum	cytosol	48.26	46.81
Os10t0122600-01	Rice	cytosol, nucleus, plastid	50.46	46.15
OQU85018	Sorghum	nucleus	51.01	45.51
Zm00001d016601_P006	Maize	cytosol	49.91	45.12
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	49.91	44.46
TraesCS6A01G097200.1	Wheat	plastid	48.81	43.56
Os02t0133200-01	Rice	plasma membrane	50.27	43.51
TraesCS6B01G125700.1	Wheat	plastid	48.81	43.41
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	52.29	43.33
HORVU6Hr1G017580.5	Barley	plastid	49.73	43.31
TraesCS6D01G085200.1	Wheat	plastid	48.63	43.25
AT5G47510.4	Thale cress	cytosol	29.43	42.71
Zm00001d015175_P002	Maize	plastid	50.09	42.48
AT2G21520.3	Thale cress	cytosol	49.36	42.39
AT1G19650.1	Thale cress	cytosol	45.7	41.12
AT1G75370.2	Thale cress	cytosol	46.07	37.72
AT3G24840.3	Thale cress	cytosol	39.49	37.24
AT1G55690.4	Thale cress	nucleus	38.94	34.08
AT5G56160.1	Thale cress	cytosol	34.92	33.1
CDY02262	Canola	cytosol, plastid	77.33	29.35
Bra013077.1-P	Field mustard	cytosol, plastid	77.33	28.99
AT1G55840.1	Thale cress	cytosol	14.81	24.92
AT5G47730.1	Thale cress	cytosol	13.53	21.7

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:816135	UniProt:A0A178VS57	ProteinID:AAD22301.2
ProteinID:AEC06490.1	EMBL:AF439836	ProteinID:ANM61228.1	ProteinID:ANM61229.1	ArrayExpress:AT2G16380	EnsemblPlantsGene:AT2G16380
RefSeq:AT2G16380	TAIR:AT2G16380	RefSeq:AT2G16380-TAIR-G	EnsemblPlants:AT2G16380.1	TAIR:AT2G16380.1	Unigene:At.14303
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0000139
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001251
InterPro:IPR036865	RefSeq:NP_001323458.1	RefSeq:NP_001323459.1	RefSeq:NP_565387.1	ProteinID:OAP07672.1	PFAM:PF00650
PFAM:PF03765	PO:PO:0000013	PO:PO:0000293	PO:PO:0001054	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0008019	PO:PO:0009006
PO:PO:0009025	PO:PO:0009047	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF77	UniProt:Q9SIW3
SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI000009D993
SEG:seg	:	:	:	:	:

Description

SFH7Phosphatidylinositol/phosphatidylcholine transfer protein SFH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIW3]

Coordinates

chr2:+:7085698..7089248

Molecular Weight (calculated)

62863.0 Da

IEP (calculated)

9.156

GRAVY (calculated)

-0.565

Length

547 amino acids

Sequence
(BLAST)

001: MADTKQDMEN SEDGRKLVKM SSLKQKAISA SNRFKNSFKK KTRRTSSKIV SVANTDDING DDYLSVEAFR QVLVLDDLLP PKHDDLHMML RFLRARKFDK
101: EKAKQMWSDM LQWRMDFGVD TIIEDFEFEE IDQVLKHYPQ GYHGVDKEGR PVYIERLGQI DANKLLQATT MDRYEKYHVK EFEKMFKIKF PSCSAAAKKH
201: IDQSTTIFDV QGVGLKNFNK SARELLQRLL KIDNDNYPET LNRMFIINAG PGFRLLWAPI KKFLDPKTTS KIHVLGNKYQ PKLLEAIDAS ELPYFFGGLC
301: TCADKGGCLR SDKGPWNDPE LLKIARNPEA RFSTISEEDY LLVEEGTSMS MVFEPLERNK MKTIEENVSE KHIDAVDKFM ALSLPPKPHL KTLRKGKEPQ
401: KKDDSFLVGG VIAFVMGIVA MLRLSKAVPR KLTDVALLTN SVYYEEAKMS KPNQDEVSAP PVSSSEYVIM VKRMAELEEK YKSLDSKSAD EALEKDDKLQ
501: AALNRVQVLE HELSETKKAL DETMVNQQGI LAYIEKKNKK KRMFFRF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.