Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68133 | Canola | cytosol | 76.2 | 83.72 |
| CDX85889 | Canola | cytosol | 75.6 | 83.2 |
| Bra003757.1-P | Field mustard | cytosol | 76.35 | 80.7 |
| AT1G19650.1 | Thale cress | cytosol | 65.12 | 71.55 |
| AT4G39170.1 | Thale cress | cytosol, nucleus, plastid | 53.29 | 57.98 |
| Solyc04g080690.1.1 | Tomato | cytosol | 24.4 | 57.19 |
| AT2G21520.3 | Thale cress | cytosol | 52.54 | 55.1 |
| PGSC0003DMT400009598 | Potato | cytosol | 27.99 | 53.28 |
| AT4G36490.1 | Thale cress | plastid | 41.02 | 50.46 |
| AT2G21540.2 | Thale cress | cytosol, nucleus, vacuole | 41.02 | 50.0 |
| AT2G18180.1 | Thale cress | plastid | 41.17 | 49.28 |
| AT4G34580.2 | Thale cress | cytosol | 40.87 | 49.28 |
| AT2G16380.1 | Thale cress | cytosol | 37.72 | 46.07 |
| AT4G39180.1 | Thale cress | cytosol | 38.17 | 46.03 |
| AT5G47510.4 | Thale cress | cytosol | 23.95 | 42.44 |
| AT3G24840.3 | Thale cress | cytosol | 36.53 | 42.07 |
| AT1G55690.4 | Thale cress | nucleus | 36.98 | 39.52 |
| AT5G56160.1 | Thale cress | cytosol | 31.89 | 36.92 |
| AT1G55840.1 | Thale cress | cytosol | 13.02 | 26.77 |
| AT5G47730.1 | Thale cress | cytosol | 11.98 | 23.46 |
Protein Annotations
| Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | EntrezGene:843873 | ProteinID:AEE35708.1 | ArrayExpress:AT1G75370 |
| EnsemblPlantsGene:AT1G75370 | RefSeq:AT1G75370 | TAIR:AT1G75370 | RefSeq:AT1G75370-TAIR-G | EnsemblPlants:AT1G75370.2 | TAIR:AT1G75370.2 |
| InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil | UniProt:F4HZ25 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0009506 | GO:GO:0016020 | InterPro:IPR001251 |
| InterPro:IPR036865 | RefSeq:NP_001154472.1 | PFAM:PF00650 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020094 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50191 |
| PANTHER:PTHR23324 | PANTHER:PTHR23324:SF145 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI0001A7B25B | SEG:seg | : | : | : | : |
Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4HZ25]
Coordinates
chr1:-:28276440..28279798
Molecular Weight (calculated)
77086.1 Da
IEP (calculated)
9.077
GRAVY (calculated)
-0.572
Length
668 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSLDRFAR PCFEGVSSND ERRERRSDFE VSEDEKKTRI GNFNFKKKAA KASSKLRHSL KKKGSSRRRS SDRTFSLTIE DIHDVEELRA VDEFRNLLVS
101: ENLLPPTLDD YHIMLRFLKA RKFDIGKTKL MWSNMIKWRK DFGTDTIFED FEFEEFDEVL KYYPHGYHGV DKEGRPVYIE RLGLVDPAKL MQVTTVERFI
201: RYHVREFEKT VNIKLPACCI AAKRHIDSST TILDVQGVGF KNFSKPARDL IIQLQKIDND NYPETLHRMF IINGGSGFKL VWATVKQFLD PKTVTKIHVI
301: GNKYQNKLLE IIDASQLPDF LGGTCTCADR GGCMRSDKGP WNDPEILKML QSGGPLCRHN SALNSFSRVS SCDKPSFSGI KASDTSTAES GSEVEEMASP
401: KVNRELRVPK LTPVCEDIRG TAISYPTDSS EYDSPMVDKV VDVAWMAHEK PKASKGSEDT PDSGKIRTVT YIWRWLMMFF VNLFTLLISL ALPQREGHSQ
501: SESSVDGPNA RESRPPSPAF ATIAERNVFS SVVNRLGDLE KQVETLHSKR HEMPREKEEL LNTAVYRVDA LEAELIATKK ALHEALMRQD DLLAYIDREE
601: DEKYHKRIHL RGFCWENRKR RFVNTNPIER TMFISKIRSH KQRFDTFGGN FRRMFFQLIF KVHFYLYQ
101: ENLLPPTLDD YHIMLRFLKA RKFDIGKTKL MWSNMIKWRK DFGTDTIFED FEFEEFDEVL KYYPHGYHGV DKEGRPVYIE RLGLVDPAKL MQVTTVERFI
201: RYHVREFEKT VNIKLPACCI AAKRHIDSST TILDVQGVGF KNFSKPARDL IIQLQKIDND NYPETLHRMF IINGGSGFKL VWATVKQFLD PKTVTKIHVI
301: GNKYQNKLLE IIDASQLPDF LGGTCTCADR GGCMRSDKGP WNDPEILKML QSGGPLCRHN SALNSFSRVS SCDKPSFSGI KASDTSTAES GSEVEEMASP
401: KVNRELRVPK LTPVCEDIRG TAISYPTDSS EYDSPMVDKV VDVAWMAHEK PKASKGSEDT PDSGKIRTVT YIWRWLMMFF VNLFTLLISL ALPQREGHSQ
501: SESSVDGPNA RESRPPSPAF ATIAERNVFS SVVNRLGDLE KQVETLHSKR HEMPREKEEL LNTAVYRVDA LEAELIATKK ALHEALMRQD DLLAYIDREE
601: DEKYHKRIHL RGFCWENRKR RFVNTNPIER TMFISKIRSH KQRFDTFGGN FRRMFFQLIF KVHFYLYQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.