Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40544 | Canola | cytosol | 87.68 | 90.61 |
| CDY28908 | Canola | cytosol | 87.68 | 90.33 |
| Bra022153.1-P | Field mustard | cytosol | 87.68 | 90.33 |
| Bra017468.1-P | Field mustard | cytosol | 87.39 | 89.49 |
| CDY41066 | Canola | cytosol | 87.1 | 89.19 |
| CDY25949 | Canola | cytosol | 87.1 | 89.19 |
| CDX77792 | Canola | cytosol | 85.04 | 86.83 |
| Bra024920.1-P | Field mustard | cytosol | 85.04 | 86.83 |
| CDY17710 | Canola | cytosol | 84.75 | 86.53 |
| KRH51210 | Soybean | cytosol | 70.38 | 73.85 |
| KRH11617 | Soybean | cytosol | 70.38 | 72.95 |
| KRH36621 | Soybean | cytosol | 70.09 | 72.64 |
| KRH01941 | Soybean | cytosol | 68.92 | 72.53 |
| VIT_10s0116g00400.t01 | Wine grape | cytosol | 71.85 | 72.49 |
| GSMUA_Achr3P12050_001 | Banana | cytosol | 66.86 | 68.26 |
| GSMUA_Achr7P06060_001 | Banana | cytosol | 65.98 | 67.57 |
| AT1G55840.1 | Thale cress | cytosol | 62.76 | 65.85 |
| PGSC0003DMT400034789 | Potato | cytosol | 64.81 | 65.38 |
| EER90026 | Sorghum | cytosol | 63.05 | 65.15 |
| Solyc11g012790.1.1 | Tomato | cytosol | 64.52 | 65.09 |
| GSMUA_Achr1P19200_001 | Banana | cytosol | 64.22 | 64.99 |
| GSMUA_Achr3P28070_001 | Banana | cytosol | 63.93 | 64.88 |
| Os02t0200000-01 | Rice | cytosol | 61.29 | 63.91 |
| TraesCS6D01G149100.1 | Wheat | cytosol | 61.0 | 63.61 |
| TraesCS6B01G188100.1 | Wheat | cytosol | 61.0 | 63.61 |
| TraesCS6A01G164200.1 | Wheat | cytosol | 61.0 | 63.61 |
| TraesCS7A01G378400.1 | Wheat | cytosol | 60.12 | 63.08 |
| EES04709 | Sorghum | cytosol | 60.41 | 63.0 |
| TraesCS7B01G280200.2 | Wheat | cytosol | 59.82 | 62.77 |
| Zm00001d015785_P001 | Maize | extracellular | 60.12 | 62.69 |
| GSMUA_Achr4P13090_001 | Banana | cytosol | 61.58 | 62.5 |
| TraesCS7D01G375200.1 | Wheat | cytosol | 59.53 | 62.46 |
| GSMUA_Achr1P09480_001 | Banana | cytosol | 60.41 | 61.49 |
| HORVU6Hr1G032510.1 | Barley | cytosol, nucleus, peroxisome | 60.7 | 60.17 |
| HORVU7Hr1G090330.11 | Barley | cytosol, nucleus, plastid | 59.82 | 60.0 |
| Zm00001d046538_P003 | Maize | cytosol | 63.34 | 54.96 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 51.91 | 51.3 |
| Os06t0607200-01 | Rice | cytosol | 20.23 | 47.59 |
| AT5G47510.4 | Thale cress | cytosol | 20.53 | 18.57 |
| AT2G21540.2 | Thale cress | cytosol, nucleus, vacuole | 23.75 | 14.78 |
| AT4G36490.1 | Thale cress | plastid | 23.46 | 14.73 |
| AT3G24840.3 | Thale cress | cytosol | 24.34 | 14.31 |
| AT4G39180.1 | Thale cress | cytosol | 23.17 | 14.26 |
| AT4G34580.2 | Thale cress | cytosol | 22.87 | 14.08 |
| AT2G18180.1 | Thale cress | plastid | 22.87 | 13.98 |
| AT2G16380.1 | Thale cress | cytosol | 21.7 | 13.53 |
| AT5G56160.1 | Thale cress | cytosol | 22.87 | 13.52 |
| AT4G39170.1 | Thale cress | cytosol, nucleus, plastid | 24.34 | 13.52 |
| AT1G55690.4 | Thale cress | nucleus | 24.63 | 13.44 |
| AT1G19650.1 | Thale cress | cytosol | 23.75 | 13.32 |
| AT2G21520.3 | Thale cress | cytosol | 24.63 | 13.19 |
| AT1G75370.2 | Thale cress | cytosol | 23.46 | 11.98 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.1 | EntrezGene:834824 | UniProt:A0A178UA25 | ProteinID:AED95563.1 | ProteinID:AED95564.1 |
| ProteinID:AED95565.1 | EMBL:AK316837 | ProteinID:ANM69303.1 | ArrayExpress:AT5G47730 | EnsemblPlantsGene:AT5G47730 | RefSeq:AT5G47730 |
| TAIR:AT5G47730 | RefSeq:AT5G47730-TAIR-G | EnsemblPlants:AT5G47730.1 | TAIR:AT5G47730.1 | Unigene:At.49141 | ProteinID:BAB11320.1 |
| EMBL:BT033019 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 |
| InterPro:IPR036865 | RefSeq:NP_001078730.1 | RefSeq:NP_001119391.1 | RefSeq:NP_001330995.1 | RefSeq:NP_199584.1 | ProteinID:OAO90818.1 |
| PFAM:PF00650 | PFAM:PF03765 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF140 |
| UniProt:Q9FIK6 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI00000A5CBA |
| SEG:seg | : | : | : | : | : |
Description
At5g47730 [Source:UniProtKB/TrEMBL;Acc:Q9FIK6]
Coordinates
chr5:-:19334250..19337148
Molecular Weight (calculated)
38863.4 Da
IEP (calculated)
7.402
GRAVY (calculated)
-0.399
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIVSEEAID EFQELMDQVE EPLKKTYERV HQGYLRENLG RFLKARDWNV CKAHTMLVEC LRWRVDNEID SILSKPIVPT ELYRDVRDSQ LIGMSGYTKE
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.