Factsheet for AT5G47510.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17730	Canola	cytosol	82.23	77.11
Bra024938.1-P	Field mustard	cytosol	82.23	77.11
CDX77773	Canola	cytosol	81.43	75.43
Zm00001d019582_P001	Maize	cytosol	42.71	50.31
Os07t0456500-01	Rice	cytosol	28.91	45.99
TraesCS2A01G499900.1	Wheat	mitochondrion	46.15	44.27
TraesCS2D01G500100.2	Wheat	mitochondrion	45.89	44.25
HORVU2Hr1G111160.14	Barley	mitochondrion	45.89	43.91
TraesCS2B01G527900.2	Wheat	mitochondrion	45.62	43.65
VIT_02s0154g00510.t01	Wine grape	cytosol	43.5	42.6
KRH77370	Soybean	cytosol	52.25	42.55
KRH28067	Soybean	cytosol	51.46	42.17
OQU88968	Sorghum	cytosol	44.56	40.88
Solyc08g078680.2.1	Tomato	cytosol	51.72	40.62
GSMUA_AchrUn_...	Banana	mitochondrion	39.79	40.43
AT4G39180.1	Thale cress	cytosol	44.03	29.96
AT2G21540.2	Thale cress	cytosol, nucleus, vacuole	43.5	29.93
AT2G16380.1	Thale cress	cytosol	42.71	29.43
AT4G34580.2	Thale cress	cytosol	42.18	28.7
AT4G36490.1	Thale cress	plastid	40.58	28.18
AT2G18180.1	Thale cress	plastid	41.11	27.78
AT5G56160.1	Thale cress	cytosol	40.05	26.17
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	41.38	25.41
AT3G24840.3	Thale cress	cytosol	38.73	25.17
AT2G21520.3	Thale cress	cytosol	41.64	24.65
AT1G19650.1	Thale cress	cytosol	39.52	24.51
AT1G75370.2	Thale cress	cytosol	42.44	23.95
AT1G55690.4	Thale cress	nucleus	39.52	23.84
AT1G55840.1	Thale cress	cytosol	18.83	21.85
AT5G47730.1	Thale cress	cytosol	18.57	20.53

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:834801	UniProt:A0A1P8BCX9	ProteinID:ANM69453.1
ArrayExpress:AT5G47510	EnsemblPlantsGene:AT5G47510	RefSeq:AT5G47510	TAIR:AT5G47510	RefSeq:AT5G47510-TAIR-G	EnsemblPlants:AT5G47510.4
Unigene:At.29887	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251
InterPro:IPR036865	RefSeq:NP_001331127.1	PFAM:PF00650	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF63
SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0008485965	:

Description

Sec14p-like phosphatidylinositol transfer family protein [Source:TAIR;Acc:AT5G47510]

Coordinates

chr5:+:19274853..19277383

Molecular Weight (calculated)

43068.6 Da

IEP (calculated)

6.399

GRAVY (calculated)

-0.523

Length

377 amino acids

Sequence
(BLAST)

001: MMQETDRDIH ISDGTMNKEE QSPNNEEMVE AFRNLLLLHG HLPDKHGDHN TLRRFLKMRD FDLEKSKEAF LNYMKWRVDY KVDLISQKFK FEEYGEVKKH
101: YPHGFHKVDK TGRPIYIERL GMTDLNAFLK ATTIERYVNY HIKEQEKTMS LRYPACSIAS DKHVSSTTTI LDVSGVGMSN FSKPARSLFM EIQKIDSNYY
201: PETLHRLFVV NASSGFRMLW LALKTFLDAR TLAKVQVLGP NYLGELLEAI EPSNLPTFLG GNCTCSDHGG CLFSDEGPWN DPGIKEKIEE PSTIEDAHSE
301: TMDKVSENAP ANQKESLGEV MITMEKYAAL KTAVKDSQKR IEMLEISLHE TKKVLNGLAE IIEAIQPNQP ITKCKPV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.