Factsheet for AT5G56160.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002841.1-P	Field mustard	cytosol	72.96	80.5
CDY51966	Canola	cytosol	81.8	79.33
CDY17397	Canola	cytosol	81.63	79.16
CDY11957	Canola	cytosol	57.54	74.61
CDY11954	Canola	cytosol	22.18	65.64
CDY36780	Canola	plastid	64.82	65.61
Zm00001d039981_P001	Maize	cytosol	13.69	64.23
HORVU1Hr1G088100.1	Barley	cytosol	16.29	58.39
Zm00001d031251_P001	Maize	cytosol, mitochondrion	12.65	56.59
HORVU7Hr1G037200.1	Barley	nucleus	19.58	52.8
Zm00001d012531_P001	Maize	mitochondrion	11.61	51.15
HORVU3Hr1G112740.3	Barley	nucleus	19.58	50.45
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	19.24	49.55
AT1G55690.4	Thale cress	nucleus	53.55	49.44
Bra028944.1-P	Field mustard	plastid	57.54	47.7
GSMUA_Achr4P09770_001	Banana	cytosol	36.05	45.61
GSMUA_Achr7P06190_001	Banana	cytosol	42.11	42.11
Zm00001d014589_P001	Maize	cytosol	6.93	41.24
Zm00001d043774_P001	Maize	cytosol	6.07	41.18
Zm00001d045670_P001	Maize	cytosol	13.34	40.96
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	20.97	40.74
HORVU6Hr1G071770.19	Barley	cytosol	43.15	40.29
GSMUA_Achr3P04130_001	Banana	nucleus	43.5	40.29
TraesCS6D01G265200.1	Wheat	cytosol	43.15	40.23
AT3G24840.3	Thale cress	cytosol	40.38	40.17
TraesCS6A01G284800.1	Wheat	cytosol	43.15	40.16
TraesCS6B01G313500.1	Wheat	cytosol	42.98	40.06
AT5G47510.4	Thale cress	cytosol	26.17	40.05
Os02t0721800-01	Rice	cytosol	42.11	39.71
GSMUA_Achr5P04200_001	Banana	plastid	42.98	39.68
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	41.94	39.67
KXG30865	Sorghum	cytosol	42.29	39.55
KXG40069	Sorghum	nucleus	42.63	39.05
TraesCS7D01G238000.2	Wheat	cytosol	40.9	39.01
Zm00001d017876_P018	Maize	cytosol	41.42	38.74
OQU80990	Sorghum	cytosol	40.73	38.72
TraesCS2B01G533900.1	Wheat	nucleus	42.11	38.57
Os08t0341700-01	Rice	nucleus	42.46	38.46
Zm00001d051674_P037	Maize	cytosol	40.73	38.4
TraesCS2D01G506400.1	Wheat	nucleus	41.77	38.07
Os08t0497300-01	Rice	cytosol, plastid	39.69	37.91
EER96946	Sorghum	cytosol, nucleus, plastid	39.34	37.9
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	43.33	37.88
Os09t0481100-01	Rice	nucleus	40.03	37.81
Zm00001d005995_P003	Maize	nucleus	38.65	37.23
AT2G21540.2	Thale cress	cytosol, nucleus, vacuole	35.01	36.86
HORVU1Hr1G091860.1	Barley	cytosol	10.4	36.81
Zm00001d031316_P020	Maize	cytosol	40.73	36.43
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	12.48	36.36
HORVU7Hr1G048880.11	Barley	mitochondrion	40.73	36.32
AT4G39180.1	Thale cress	cytosol	34.84	36.28
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	38.13	35.83
AT4G34580.2	Thale cress	cytosol	34.14	35.56
AT1G19650.1	Thale cress	cytosol	37.44	35.53
AT4G36490.1	Thale cress	plastid	33.28	35.36
AT2G21520.3	Thale cress	cytosol	38.82	35.16
TraesCS7B01G135600.2	Wheat	plastid	40.55	35.08
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	40.73	35.02
AT2G16380.1	Thale cress	cytosol	33.1	34.92
Zm00001d050131_P002	Maize	cytosol	37.78	34.12
AT2G18180.1	Thale cress	plastid	32.76	33.87
Zm00001d045718_P001	Maize	cytosol	14.73	33.6
Zm00001d052840_P016	Maize	plastid	40.55	32.28
AT1G75370.2	Thale cress	cytosol	36.92	31.89
Zm00001d010393_P001	Maize	plastid	18.89	29.95
Zm00001d037983_P001	Maize	cytosol	11.96	29.24
AT1G55840.1	Thale cress	cytosol	13.17	23.38
AT5G47730.1	Thale cress	cytosol	13.52	22.87
Zm00001d047488_P001	Maize	nucleus	6.24	22.5
Zm00001d035370_P003	Maize	plastid	11.61	16.42
Zm00001d005778_P001	Maize	plastid	6.24	12.81
Bra002840.1-P	Field mustard	cytosol	0.52	3.9
CDY36781	Canola	extracellular	0.52	1.79

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:835715	UniProt:A0A178UD46	ProteinID:AED96728.1
EMBL:AK226714	ProteinID:ANM69494.1	ArrayExpress:AT5G56160	EnsemblPlantsGene:AT5G56160	RefSeq:AT5G56160	TAIR:AT5G56160
RefSeq:AT5G56160-TAIR-G	EnsemblPlants:AT5G56160.1	TAIR:AT5G56160.1	Unigene:At.29403	ProteinID:BAB09298.1	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	UniProt:F4K6D3	GO:GO:0000139	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001251	InterPro:IPR036865
RefSeq:NP_001331164.1	RefSeq:NP_200427.3	ProteinID:OAO91713.1	PFAM:PF00650	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007095	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF84	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix
UniParc:UPI0001505867	SEG:seg	:	:	:	:

Description

SFH14Phosphatidylinositol/phosphatidylcholine transfer protein SFH14 [Source:UniProtKB/Swiss-Prot;Acc:F4K6D3]

Coordinates

chr5:+:22731965..22735612

Molecular Weight (calculated)

66261.8 Da

IEP (calculated)

7.166

GRAVY (calculated)

-0.516

Length

577 amino acids

Sequence
(BLAST)

001: MSGREQTGEK LSDSEYIEEE PRRSRIGNLK KKAFSCSTKL THPLKMRKGK RKIDFQIPLI EDVRDEKEEK LVSKLRQQLL QKDLLPPVHD DYHMLLRFLK
101: TMEFKIEKTV TAWEEMLKWR KEFGTDRIIQ DFNFKELDEV TRHYPQGYHG VDKDGRPIYI ERLGKAHPGK LMEVTTIERY LKYHVQEFER TLQEKLPACS
201: VAAKRRVTTT TTILDVEGLG MKNFTPTAAN LLATIAKVDC NYYPETLHRM FIVNAGIGFR SFLWPAAQKL LDPMTIAKIQ VLEPRSLSKL LEAIDSSQLP
301: EFLGGLCKCP NEGGCLRSNK GPWNDPEIVE LVHHMEVNNV PQTTTAPLHV RDYDSTTCTI SPKETLKEEP EPEEYYSSTG SRSSMHTCIV PPLSDKASTS
401: DGDKFITTVE SIESAQSQLL DADTENTFAN TSVREGGQIL RFGALREKIN SENIFHLVKI LLVFPLKLFV LFGFLLPGYW QRQNTVVVPD SSTNNKVLEC
501: FDRLKKMEKE FTEISRKQVK IPEANEKLLA ESLERIKSLE LDLDKTKSVL HITLTKQLQI TEQLESQDEE RRKGCCF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.