Factsheet for AT3G24840.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52084	Canola	cytosol	81.9	80.92
CDX77382	Canola	cytosol	82.76	77.54
Bra015089.1-P	Field mustard	cytosol	70.17	76.07
KRG99773	Soybean	cytosol, nucleus, plastid	57.24	55.89
KRH46724	Soybean	cytosol, nucleus, plastid	55.52	54.21
VIT_07s0005g06640.t01	Wine grape	endoplasmic reticulum	56.21	53.36
Solyc09g060090.2.1	Tomato	cytosol	53.45	52.28
PGSC0003DMT400045517	Potato	cytosol	53.28	52.11
GSMUA_Achr9P01730_001	Banana	plastid	29.83	50.14
AT4G36490.1	Thale cress	plastid	40.0	42.73
AT4G39180.1	Thale cress	cytosol	40.34	42.24
AT2G21540.2	Thale cress	cytosol, nucleus, vacuole	39.83	42.15
GSMUA_Achr6P06610_001	Banana	mitochondrion	30.86	41.15
AT4G34580.2	Thale cress	cytosol	39.14	40.97
AT1G55690.4	Thale cress	nucleus	43.97	40.8
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	43.1	40.72
AT2G18180.1	Thale cress	plastid	39.14	40.68
AT5G56160.1	Thale cress	cytosol	40.17	40.38
AT2G16380.1	Thale cress	cytosol	37.24	39.49
AT1G19650.1	Thale cress	cytosol	41.38	39.47
AT5G47510.4	Thale cress	cytosol	25.17	38.73
AT2G21520.3	Thale cress	cytosol	42.07	38.3
AT1G75370.2	Thale cress	cytosol	42.07	36.53
AT1G55840.1	Thale cress	cytosol	14.14	25.23
AT5G47730.1	Thale cress	cytosol	14.31	24.34

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:822082	UniProt:A0A178VMA9	UniProt:A0A1I9LTJ5
ProteinID:ANM65903.1	ProteinID:ANM65905.1	ProteinID:ANM65907.1	ArrayExpress:AT3G24840	EnsemblPlantsGene:AT3G24840	RefSeq:AT3G24840
TAIR:AT3G24840	RefSeq:AT3G24840-TAIR-G	EnsemblPlants:AT3G24840.3	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251	InterPro:IPR036865	RefSeq:NP_001327840.1	RefSeq:NP_001327842.1
RefSeq:NP_001327844.1	ProteinID:OAP06908.1	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF100	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0007E01315
SEG:seg	:	:	:	:	:

Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMA9]

Coordinates

chr3:+:9066601..9070661

Molecular Weight (calculated)

66757.4 Da

IEP (calculated)

8.761

GRAVY (calculated)

-0.592

Length

580 amino acids

Sequence
(BLAST)

001: MPALGEILLV PETDKGKSKD YIEVSEDEKI TRTRSRSLKK KAIKASNKLT HSLRKRGKRV ADQYAPIVIE DVRDEEEEKA VNVFRKALVS LDLLPPRHDD
101: YHTMLRFLKA RRFDLEKTVQ MWEEMLKWRK ENGVDTIIQD FVYDEYEEVQ QYYPHGYHGV DREGRPVYIE RLGKIDPGKL MKVTTLERFL RYHVQGFEKT
201: FSEKFPACSI AAKRHINSST TIIDVHGVSW MSFRKLAQDL VMRMQKIDGD NYPETLNQMY IINAGNGFKL VWNTVKGFLD PKTTSKIHVL GNKYRSHLLE
301: IIDPSELPEF LGGNCKCAHE GGCMRFNKGP WNDPEIMKLV RSRDAMYKPK EMGLLENGEV AKLFSLRQHV NTDMSSPDGG HVRERESHPE HDKRAQLSNQ
401: AEAVGVGRME QSDSTSPLPN NLAVERSLTT SLQKVASFLA RFILQLLGSL CLMFRILGRL VNKQPENQLR PELSVSVSQQ QVPPPQVHPC WLRLQNLETM
501: VTVLCDKPSS IPQEKEDILR DSLDRIKSIE QDLQKTKKAL FLTASKQIEL AECFENLKES SSTGMRSCWP RHCRNFQAET

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.