Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g060090.2.1 | Tomato | cytosol | 98.48 | 98.48 |
| VIT_07s0005g06640.t01 | Wine grape | endoplasmic reticulum | 61.38 | 59.57 |
| KRG99773 | Soybean | cytosol, nucleus, plastid | 57.5 | 57.41 |
| KRH46724 | Soybean | cytosol, nucleus, plastid | 56.83 | 56.73 |
| AT3G24840.3 | Thale cress | cytosol | 52.11 | 53.28 |
| CDY52084 | Canola | cytosol | 52.11 | 52.64 |
| GSMUA_Achr9P01730_001 | Banana | plastid | 29.68 | 51.01 |
| CDX77382 | Canola | cytosol | 51.77 | 49.6 |
| PGSC0003DMT400009598 | Potato | cytosol | 27.82 | 47.01 |
| Bra015089.1-P | Field mustard | cytosol | 41.65 | 46.17 |
| PGSC0003DMT400057292 | Potato | nucleus | 44.18 | 42.39 |
| PGSC0003DMT400043532 | Potato | cytosol | 39.8 | 42.37 |
| PGSC0003DMT400001903 | Potato | cytosol, nucleus, plastid | 39.97 | 41.29 |
| PGSC0003DMT400043545 | Potato | cytosol | 44.69 | 41.21 |
| PGSC0003DMT400001942 | Potato | cytosol | 43.0 | 40.8 |
| GSMUA_Achr6P06610_001 | Banana | mitochondrion | 29.17 | 39.77 |
| PGSC0003DMT400021690 | Potato | nucleus | 39.12 | 38.41 |
| PGSC0003DMT400022405 | Potato | cytosol, nucleus | 37.27 | 37.97 |
| PGSC0003DMT400057025 | Potato | cytosol | 13.66 | 24.04 |
| PGSC0003DMT400034789 | Potato | cytosol | 13.49 | 23.67 |
Protein Annotations
| Gene3D:1.10.8.20 | EntrezGene:102586852 | Gene3D:3.40.525.10 | MapMan:35.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | UniProt:M1BHT0 | PFAM:PF00650 |
| PFAM:PF03765 | EnsemblPlantsGene:PGSC0003DMG401017657 | PGSC:PGSC0003DMG401017657 | EnsemblPlants:PGSC0003DMT400045517 | PRINTS:PR00180 | PFscan:PS50191 |
| PANTHER:PTHR23324 | PANTHER:PTHR23324:SF100 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI00029548FB | RefSeq:XP_006356777.1 | RefSeq:XP_006356778.1 | : | : | : |
Description
Transporter [Source:PGSC_GENE;Acc:PGSC0003DMG401017657]
Coordinates
chr9:-:43807448..43816868
Molecular Weight (calculated)
68300.0 Da
IEP (calculated)
9.284
GRAVY (calculated)
-0.573
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEIVGIHDH ERTKRYYFEA SEDEKRRTRI RSLKKKAMSA STKLTHSLKR RSKRVAHCRF ASISTEDFRD EKEEEAVNSF RQALIEKDLL PARHDDYHTM
101: LRFLKARKFD LDKAMLMWSE MLNWRKEQGV DTIIEDFAYE EYEEIQRYYP HGYHGVDRGG RPVYIERLGK IEPTKLMNVT TIERFLKYHI QGFERTFAEK
201: FPACSIAARR HIDSSTTILD VQGLNWRSFG KLAHDLVMRM QKIDGDNYPE TLHQMFIVNA GNGFRFLWNT AKGFLDPKTT AKIHVLGNKF QSNLAEVIDP
301: SQLPDFLGGT CSCPNPDGCL RSDKGPWNDP ELMKLVHALH GEALYPRRIT SFSDSDIEIK PVSPQLLRNE IGSAESEVEV GVSAYSIMQS KQLSDKVPTR
401: RSVSFGSLVQ EDYGLMLTDE HLNSPNRATV SVQRRSPEKS IFSLMINMMV KSLAWICFLF HGVGRLFVKN SDANRLRNGR VSVNASSAEQ NVSSPKKEDL
501: LHPCCQRLQH LENVVADLLK KPTKIPPEKE LMLLDSMDRI KFIEYDLQRT KKALLATASQ QVELAESMES LKENKLKVTN SCWRRGRPSQ YKT
101: LRFLKARKFD LDKAMLMWSE MLNWRKEQGV DTIIEDFAYE EYEEIQRYYP HGYHGVDRGG RPVYIERLGK IEPTKLMNVT TIERFLKYHI QGFERTFAEK
201: FPACSIAARR HIDSSTTILD VQGLNWRSFG KLAHDLVMRM QKIDGDNYPE TLHQMFIVNA GNGFRFLWNT AKGFLDPKTT AKIHVLGNKF QSNLAEVIDP
301: SQLPDFLGGT CSCPNPDGCL RSDKGPWNDP ELMKLVHALH GEALYPRRIT SFSDSDIEIK PVSPQLLRNE IGSAESEVEV GVSAYSIMQS KQLSDKVPTR
401: RSVSFGSLVQ EDYGLMLTDE HLNSPNRATV SVQRRSPEKS IFSLMINMMV KSLAWICFLF HGVGRLFVKN SDANRLRNGR VSVNASSAEQ NVSSPKKEDL
501: LHPCCQRLQH LENVVADLLK KPTKIPPEKE LMLLDSMDRI KFIEYDLQRT KKALLATASQ QVELAESMES LKENKLKVTN SCWRRGRPSQ YKT
001: MPALGEILLV PETDKGKSKD YIEVSEDEKI TRTRSRSLKK KAIKASNKLT HSLRKRGKRV ADQYAPIVIE DVRDEEEEKA VNVFRKALVS LDLLPPRHDD
101: YHTMLRFLKA RRFDLEKTVQ MWEEMLKWRK ENGVDTIIQD FVYDEYEEVQ QYYPHGYHGV DREGRPVYIE RLGKIDPGKL MKVTTLERFL RYHVQGFEKT
201: FSEKFPACSI AAKRHINSST TIIDVHGVSW MSFRKLAQDL VMRMQKIDGD NYPETLNQMY IINAGNGFKL VWNTVKGFLD PKTTSKIHVL GNKYRSHLLE
301: IIDPSELPEF LGGNCKCAHE GGCMRFNKGP WNDPEIMKLV RSRDAMYKPK EMGLLENGEV AKLFSLRHVN TDMSSPDGGH VRERESHPEH DKRAQLSNQA
401: EAVGVGRMEQ SDSTSPLPNN LAVERSLTTS LQKVASFLAR FILQLLGSLC LMFRILGRLV NKQPENQLRP ELSVSVSQQQ VPPPQVHPCW LRLQNLETMV
501: TVLCDKPSSI PQEKEDILRD SLDRIKSIEQ DLQKTKKALF LTASKQIELA ECFENLKESS STGMRSCWPR HCRNFQAET
101: YHTMLRFLKA RRFDLEKTVQ MWEEMLKWRK ENGVDTIIQD FVYDEYEEVQ QYYPHGYHGV DREGRPVYIE RLGKIDPGKL MKVTTLERFL RYHVQGFEKT
201: FSEKFPACSI AAKRHINSST TIIDVHGVSW MSFRKLAQDL VMRMQKIDGD NYPETLNQMY IINAGNGFKL VWNTVKGFLD PKTTSKIHVL GNKYRSHLLE
301: IIDPSELPEF LGGNCKCAHE GGCMRFNKGP WNDPEIMKLV RSRDAMYKPK EMGLLENGEV AKLFSLRHVN TDMSSPDGGH VRERESHPEH DKRAQLSNQA
401: EAVGVGRMEQ SDSTSPLPNN LAVERSLTTS LQKVASFLAR FILQLLGSLC LMFRILGRLV NKQPENQLRP ELSVSVSQQQ VPPPQVHPCW LRLQNLETMV
501: TVLCDKPSSI PQEKEDILRD SLDRIKSIEQ DLQKTKKALF LTASKQIELA ECFENLKESS STGMRSCWPR HCRNFQAET
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMA9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.