Factsheet for PGSC0003DMT400001942

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g109870.2.1	Tomato	cytosol	96.48	96.48
PGSC0003DMT400043545	Potato	cytosol	83.84	81.49
GSMUA_Achr3P28830_001	Banana	nucleus	33.44	78.87
VIT_03s0038g04470.t01	Wine grape	cytosol	77.6	77.6
KRH29416	Soybean	cytosol	76.32	75.83
Bra030295.1-P	Field mustard	cytosol	34.08	75.27
CDY15888	Canola	cytosol	34.08	75.27
KRH24438	Soybean	cytosol	75.68	75.2
CDX99587	Canola	cytosol, mitochondrion	33.6	74.2
KRH60804	Soybean	cytosol	73.92	74.04
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	72.0	73.29
CDX82040	Canola	cytosol	69.6	72.14
GSMUA_Achr1P12050_001	Banana	cytosol	72.0	71.89
CDY13810	Canola	cytosol	72.48	71.68
CDY12125	Canola	cytosol	70.4	71.43
AT2G21520.3	Thale cress	cytosol	72.48	71.11
CDX90316	Canola	cytosol	70.08	70.87
Bra010700.1-P	Field mustard	cytosol	69.92	70.71
GSMUA_Achr2P09690_001	Banana	cytosol	70.72	70.61
Bra031196.1-P	Field mustard	cytosol	71.04	70.25
KRH51499	Soybean	cytosol	72.0	70.2
GSMUA_Achr9P22020_001	Banana	cytosol	68.48	67.83
KXG29407	Sorghum	cytosol, nucleus, plastid	66.4	66.29
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	65.28	64.76
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	65.28	64.76
GSMUA_Achr10P...	Banana	cytosol	57.44	64.34
Zm00001d015174_P005	Maize	cytosol	66.4	63.46
Os02t0133100-01	Rice	cytosol	42.72	63.12
Zm00001d053994_P008	Maize	cytosol, mitochondrion	66.24	62.16
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	62.56	60.06
Os05t0545000-01	Rice	cytosol, nucleus, plastid	58.88	60.03
Zm00001d038880_P001	Maize	cytosol	57.76	58.41
Zm00001d009439_P004	Maize	cytosol	57.76	58.41
KXG22454	Sorghum	cytosol	57.6	58.16
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	57.76	58.13
GSMUA_Achr3P28840_001	Banana	mitochondrion	33.44	56.79
PGSC0003DMT400009598	Potato	cytosol	31.68	56.41
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	51.36	55.92
PGSC0003DMT400043532	Potato	cytosol	49.6	55.66
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	65.44	54.9
KXG33199	Sorghum	cytosol	51.84	53.55
PGSC0003DMT400021690	Potato	nucleus	51.04	52.81
TraesCS3D01G255900.4	Wheat	cytosol	51.52	52.36
GSMUA_Achr1P25320_001	Banana	cytosol	54.4	51.99
Zm00001d011663_P003	Maize	cytosol	50.72	51.63
TraesCS3A01G255000.6	Wheat	cytosol	52.0	50.94
TraesCS3B01G287000.6	Wheat	cytosol	52.0	50.94
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	57.44	50.28
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	56.96	50.0
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	52.8	49.33
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	57.28	49.11
Zm00001d043733_P002	Maize	mitochondrion	43.04	49.0
Os01t0701900-01	Rice	nucleus	50.72	47.24
PGSC0003DMT400045517	Potato	cytosol	40.8	43.0
PGSC0003DMT400057292	Potato	nucleus	42.24	42.72
PGSC0003DMT400022405	Potato	cytosol, nucleus	35.84	38.49
PGSC0003DMT400057025	Potato	cytosol	14.4	26.71
PGSC0003DMT400034789	Potato	cytosol	13.6	25.15

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:102594427	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR001251	InterPro:IPR036865	UniProt:M0ZJD6	PFAM:PF00650	PFAM:PF03765	EnsemblPlantsGene:PGSC0003DMG400000738
PGSC:PGSC0003DMG400000738	EnsemblPlants:PGSC0003DMT400001942	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF145
SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI0002948EC1
RefSeq:XP_006365129.1	SEG:seg	:	:	:	:

Description

Phosphatidylinositol transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400000738]

Coordinates

chr1:-:86160370..86165726

Molecular Weight (calculated)

71175.5 Da

IEP (calculated)

8.915

GRAVY (calculated)

-0.557

Length

625 amino acids

Sequence
(BLAST)

001: MSGPLDRFAR PCFEGSSTHD ERRERKSDFE NSEDERRTRI GSLKKKALNA STKFKHSLKK KSSRRKSNVR LSSLSIEDIR DAEELQAVDQ FRQSLLLDEL
101: LPERHDDYYM MLRFLKARKF DIEKAKHMWA DMLQWRKDFG TDTITQDFEF PELEEVVKYY PQGYHGIDKE GRPVYIERLG KVDPNKLMQV TTMDRYIKYH
201: VREFEKTFLI KFPACTIAAK RQIDCSTTIL DVQGVGLKNF SKSARELILR LQKIDGDNYP ETLHQMFIIN AGAGFRLLWN TVKSFLDPKT ASKIHVLGNK
301: YQNKLLEIVD ASELPDFIGG NCTCADRGGC MRSDKGPWQN PDILKMIGEA RRAKQLVKVL NSEGKIVYAK PRYPTVKGSS DTSTAESGSE AEDIASPKAV
401: RSYSHLRLTP VREEAKAIGM PGYTSNFPGY DEYVPMVDKA VDSAWKKEPS LQRPSTPKAM LPPAGSEKPV EGLHTRVLGL LMAFFMTVVV LFRSVTCRVT
501: KKLQDASTVE NQDVQDFTFD ASPKEEFRPP SPTPAFTEAQ LLSVVLKRLG ELEDKVNTLQ EKPSEMPYEK AELLNAAVCR VDGLEAELIA TKKALHEALM
601: RQEELLAYID GQEAAKFQKK KKFCF

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.