Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc04g080690.1.1 | Tomato | cytosol | 71.79 | 88.42 |
PGSC0003DMT400043532 | Potato | cytosol | 52.14 | 32.85 |
CDY39363 | Canola | cytosol | 54.99 | 32.6 |
PGSC0003DMT400001903 | Potato | cytosol, nucleus, plastid | 52.99 | 32.4 |
PGSC0003DMT400043545 | Potato | cytosol | 58.69 | 32.04 |
CDX68133 | Canola | cytosol | 55.27 | 31.91 |
AT1G19650.1 | Thale cress | cytosol | 55.27 | 31.91 |
CDX85889 | Canola | cytosol | 54.99 | 31.8 |
PGSC0003DMT400001942 | Potato | cytosol | 56.41 | 31.68 |
Bra025754.1-P | Field mustard | nucleus | 54.42 | 31.31 |
CDY29415 | Canola | nucleus | 54.7 | 31.22 |
Bra003757.1-P | Field mustard | cytosol | 54.99 | 30.54 |
PGSC0003DMT400021690 | Potato | nucleus | 51.0 | 29.64 |
AT1G75370.2 | Thale cress | cytosol | 53.28 | 27.99 |
PGSC0003DMT400045517 | Potato | cytosol | 47.01 | 27.82 |
PGSC0003DMT400057292 | Potato | nucleus | 46.44 | 26.38 |
PGSC0003DMT400022405 | Potato | cytosol, nucleus | 37.61 | 22.68 |
PGSC0003DMT400057025 | Potato | cytosol | 20.51 | 21.36 |
PGSC0003DMT400034789 | Potato | cytosol | 19.94 | 20.71 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400009598 | EnsemblPlantsGene:PGSC0003DMG401003745 | Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF55 | PFAM:PF00650 |
PFscan:PS50191 | PGSC:PGSC0003DMG401003745 | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000295E745 |
UniProt:M0ZWK8 | MapMan:35.1 | : | : | : | : |
Description
Phosphatidylinositol transfer III [Source:PGSC_GENE;Acc:PGSC0003DMG401003745]
Coordinates
chr4:-:70081749..70086479
Molecular Weight (calculated)
40685.1 Da
IEP (calculated)
5.798
GRAVY (calculated)
-0.303
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLQISTGGE GSLFDHGNYE DQLHSTMIRS QNDIKEELEF VNDFRQILIL ENLLPPMHDD NLKLLRFLKA RKSDIQMAKL MWTNMLQWRA EFGTDTIIKD
101: FNFHERDEVI QNYPQGYHGT DREGRPVYIE RLGLMNVDKL LEVTTLDRYV KYHVQEFEKS IAFRFPACSV AAKRHIDRGV TILDVEGVSL RNFTKPVREV
201: ILQLQKIDND YYPETLGEMF VINAGPGFRL LWHILKPFLD PETTSKIHVL GNNYQGKLLE IIDECELPDF LGGRCTCEND GGCLRSDKGS WRTLKEISME
301: AECLEKTMAT SNVTRQLKPA TDCMYIPFSF SYIEKLCCLF LKILCHIAHT L
101: FNFHERDEVI QNYPQGYHGT DREGRPVYIE RLGLMNVDKL LEVTTLDRYV KYHVQEFEKS IAFRFPACSV AAKRHIDRGV TILDVEGVSL RNFTKPVREV
201: ILQLQKIDND YYPETLGEMF VINAGPGFRL LWHILKPFLD PETTSKIHVL GNNYQGKLLE IIDECELPDF LGGRCTCEND GGCLRSDKGS WRTLKEISME
301: AECLEKTMAT SNVTRQLKPA TDCMYIPFSF SYIEKLCCLF LKILCHIAHT L
001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KNKFDAENTK FIPMIDKTVN ASTWPTNLHK SNYPEPEDLY
401: SAVKPSQRRG GEGYLFGGVM SLVMGLMTVV RLTKNMPRKL TEAAIYGGEV DKAETTMVSN QEYMSMVKRM AELEEKCRSL DNQPAAFSPE KEQILTAALS
501: RVDELELQLA QTKKTLEETM ATQHVIMAYI DKKKKKKKFF GF
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KNKFDAENTK FIPMIDKTVN ASTWPTNLHK SNYPEPEDLY
401: SAVKPSQRRG GEGYLFGGVM SLVMGLMTVV RLTKNMPRKL TEAAIYGGEV DKAETTMVSN QEYMSMVKRM AELEEKCRSL DNQPAAFSPE KEQILTAALS
501: RVDELELQLA QTKKTLEETM ATQHVIMAYI DKKKKKKKFF GF
Arabidopsis Description
SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.