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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g080690.1.1 Tomato cytosol 71.79 88.42
PGSC0003DMT400043532 Potato cytosol 52.14 32.85
CDY39363 Canola cytosol 54.99 32.6
PGSC0003DMT400001903 Potato cytosol, nucleus, plastid 52.99 32.4
PGSC0003DMT400043545 Potato cytosol 58.69 32.04
CDX68133 Canola cytosol 55.27 31.91
AT1G19650.1 Thale cress cytosol 55.27 31.91
CDX85889 Canola cytosol 54.99 31.8
PGSC0003DMT400001942 Potato cytosol 56.41 31.68
Bra025754.1-P Field mustard nucleus 54.42 31.31
CDY29415 Canola nucleus 54.7 31.22
Bra003757.1-P Field mustard cytosol 54.99 30.54
PGSC0003DMT400021690 Potato nucleus 51.0 29.64
AT1G75370.2 Thale cress cytosol 53.28 27.99
PGSC0003DMT400045517 Potato cytosol 47.01 27.82
PGSC0003DMT400057292 Potato nucleus 46.44 26.38
PGSC0003DMT400022405 Potato cytosol, nucleus 37.61 22.68
PGSC0003DMT400057025 Potato cytosol 20.51 21.36
PGSC0003DMT400034789 Potato cytosol 19.94 20.71
Protein Annotations
EnsemblPlants:PGSC0003DMT400009598EnsemblPlantsGene:PGSC0003DMG401003745Gene3D:1.10.8.20Gene3D:3.40.525.10InterPro:CRAL-TRIO_domInterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom_sfInterPro:IPR001251InterPro:IPR036865PANTHER:PTHR23324PANTHER:PTHR23324:SF55PFAM:PF00650
PFscan:PS50191PGSC:PGSC0003DMG401003745SMART:SM00516SUPFAM:SSF46938SUPFAM:SSF52087UniParc:UPI000295E745
UniProt:M0ZWK8MapMan:35.1::::
Description
Phosphatidylinositol transfer III [Source:PGSC_GENE;Acc:PGSC0003DMG401003745]
Coordinates
chr4:-:70081749..70086479
Molecular Weight (calculated)
40685.1 Da
IEP (calculated)
5.798
GRAVY (calculated)
-0.303
Length
351 amino acids
Sequence
(BLAST)
001: MNLQISTGGE GSLFDHGNYE DQLHSTMIRS QNDIKEELEF VNDFRQILIL ENLLPPMHDD NLKLLRFLKA RKSDIQMAKL MWTNMLQWRA EFGTDTIIKD
101: FNFHERDEVI QNYPQGYHGT DREGRPVYIE RLGLMNVDKL LEVTTLDRYV KYHVQEFEKS IAFRFPACSV AAKRHIDRGV TILDVEGVSL RNFTKPVREV
201: ILQLQKIDND YYPETLGEMF VINAGPGFRL LWHILKPFLD PETTSKIHVL GNNYQGKLLE IIDECELPDF LGGRCTCEND GGCLRSDKGS WRTLKEISME
301: AECLEKTMAT SNVTRQLKPA TDCMYIPFSF SYIEKLCCLF LKILCHIAHT L
Best Arabidopsis Sequence Match ( AT2G21540.3 )
(BLAST)
001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KNKFDAENTK FIPMIDKTVN ASTWPTNLHK SNYPEPEDLY
401: SAVKPSQRRG GEGYLFGGVM SLVMGLMTVV RLTKNMPRKL TEAAIYGGEV DKAETTMVSN QEYMSMVKRM AELEEKCRSL DNQPAAFSPE KEQILTAALS
501: RVDELELQLA QTKKTLEETM ATQHVIMAYI DKKKKKKKFF GF
Arabidopsis Description
SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.