Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g065700.2.1 | Tomato | cytosol | 51.93 | 95.11 |
| VIT_19s0015g00760.t01 | Wine grape | cytosol | 70.92 | 70.71 |
| KRG82898 | Soybean | cytosol | 38.58 | 69.15 |
| KRH46406 | Soybean | cytosol | 53.12 | 69.11 |
| GSMUA_Achr1P19200_001 | Banana | cytosol | 68.84 | 68.84 |
| Os02t0200000-01 | Rice | cytosol | 66.77 | 68.81 |
| GSMUA_Achr3P12050_001 | Banana | cytosol | 67.95 | 68.56 |
| TraesCS6A01G164200.1 | Wheat | cytosol | 65.58 | 67.58 |
| TraesCS6B01G188100.1 | Wheat | cytosol | 65.58 | 67.58 |
| TraesCS6D01G149100.1 | Wheat | cytosol | 65.58 | 67.58 |
| EER90026 | Sorghum | cytosol | 66.17 | 67.58 |
| GSMUA_Achr7P06060_001 | Banana | cytosol | 66.77 | 67.57 |
| EES04709 | Sorghum | cytosol | 65.28 | 67.28 |
| KRH46410 | Soybean | cytosol | 67.36 | 67.16 |
| Zm00001d015785_P001 | Maize | extracellular | 64.39 | 66.36 |
| TraesCS7D01G375200.1 | Wheat | cytosol | 63.5 | 65.85 |
| TraesCS7A01G378400.1 | Wheat | cytosol | 63.2 | 65.54 |
| TraesCS7B01G280200.2 | Wheat | cytosol | 63.2 | 65.54 |
| KRH14208 | Soybean | cytosol | 62.02 | 64.91 |
| HORVU6Hr1G032510.1 | Barley | cytosol, nucleus, peroxisome | 65.28 | 63.95 |
| KRH73923 | Soybean | cytosol | 39.76 | 63.81 |
| GSMUA_Achr3P28070_001 | Banana | cytosol | 63.2 | 63.39 |
| PGSC0003DMT400034789 | Potato | cytosol | 63.2 | 63.02 |
| HORVU7Hr1G090330.11 | Barley | cytosol, nucleus, plastid | 63.5 | 62.94 |
| KRH46400 | Soybean | cytosol | 49.26 | 61.71 |
| GSMUA_Achr4P13090_001 | Banana | cytosol | 59.94 | 60.12 |
| KRH65859 | Soybean | cytosol | 24.93 | 58.74 |
| GSMUA_Achr1P09480_001 | Banana | cytosol | 56.97 | 57.31 |
| KRG98457 | Soybean | cytosol | 67.66 | 55.61 |
| Zm00001d046538_P003 | Maize | cytosol | 64.69 | 55.47 |
| KRG82897 | Soybean | cytosol | 17.51 | 54.13 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 55.19 | 53.91 |
| KRH75081 | Soybean | extracellular, mitochondrion | 19.58 | 53.66 |
| Os06t0607200-01 | Rice | cytosol | 21.36 | 49.66 |
| PGSC0003DMT400009598 | Potato | cytosol | 21.36 | 20.51 |
| PGSC0003DMT400001903 | Potato | cytosol, nucleus, plastid | 25.22 | 14.81 |
| PGSC0003DMT400043532 | Potato | cytosol | 24.33 | 14.72 |
| PGSC0003DMT400001942 | Potato | cytosol | 26.71 | 14.4 |
| PGSC0003DMT400021690 | Potato | nucleus | 25.52 | 14.24 |
| PGSC0003DMT400043545 | Potato | cytosol | 26.41 | 13.84 |
| PGSC0003DMT400057292 | Potato | nucleus | 25.22 | 13.75 |
| PGSC0003DMT400045517 | Potato | cytosol | 24.04 | 13.66 |
| PGSC0003DMT400022405 | Potato | cytosol, nucleus | 18.69 | 10.82 |
Protein Annotations
| EntrezGene:102579415 | Gene3D:3.40.525.10 | MapMan:35.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | UniProt:M1C090 | PFAM:PF00650 | PFAM:PF03765 |
| EnsemblPlantsGene:PGSC0003DMG400022166 | PGSC:PGSC0003DMG400022166 | EnsemblPlants:PGSC0003DMT400057025 | PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF140 |
| SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000296D8D2 | RefSeq:XP_006346122.1 |
Description
SEC14 cytosolic factor [Source:PGSC_GENE;Acc:PGSC0003DMG400022166]
Coordinates
chr7:-:55737401..55742572
Molecular Weight (calculated)
38169.7 Da
IEP (calculated)
7.599
GRAVY (calculated)
-0.406
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFITEDMIK QLQTSMDEIA EPLQKSFQNV HQGYRTETLV RFLKARDGSV SKAHKMLLDC LNWRIDNEID QILAKPIVPT DFYRGVRDTQ LVGMSGYTRE
101: GLPVVAVGVG LSTYDKASIH YYIQSHIQMN EYRDRMILPS ASKKFGRYIG TCVKVLDMTG LKLSALNQIK LLTSISTIDD LNYPEKTDTY YIVNAPYIFS
201: ACWKVVRPLL QERTKKKVQV LSGSGKDELL KIMDYASLPH FCKREGSGSS KHSRNGTNDN CFSFDHTFHQ QLYDHTKQQA LALEAVAPSK EGSVHVTLPE
301: PDPDDAKIAE TIESTFQRMG EKNGICQSFH EIKINGD
101: GLPVVAVGVG LSTYDKASIH YYIQSHIQMN EYRDRMILPS ASKKFGRYIG TCVKVLDMTG LKLSALNQIK LLTSISTIDD LNYPEKTDTY YIVNAPYIFS
201: ACWKVVRPLL QERTKKKVQV LSGSGKDELL KIMDYASLPH FCKREGSGSS KHSRNGTNDN CFSFDHTFHQ QLYDHTKQQA LALEAVAPSK EGSVHVTLPE
301: PDPDDAKIAE TIESTFQRMG EKNGICQSFH EIKINGD
001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI
Arabidopsis Description
At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.