CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015785_P001	Maize	extracellular	94.5	94.5
Os02t0200000-01	Rice	cytosol	87.77	87.77
TraesCS6D01G149100.1	Wheat	cytosol	83.49	83.49
TraesCS6B01G188100.1	Wheat	cytosol	83.49	83.49
TraesCS6A01G164200.1	Wheat	cytosol	83.49	83.49
HORVU6Hr1G032510.1	Barley	cytosol, nucleus, peroxisome	83.18	79.07
Zm00001d053648_P005	Maize	cytosol, endoplasmic reticulum, plastid	81.04	76.81
EER90026	Sorghum	cytosol	76.45	75.76
Solyc07g065700.2.1	Tomato	cytosol	37.0	65.76
PGSC0003DMT400057025	Potato	cytosol	67.28	65.28
VIT_19s0015g00760.t01	Wine grape	cytosol	66.97	64.79
KRG82898	Soybean	cytosol	36.09	62.77
KRH46410	Soybean	cytosol	64.53	62.43
CDY40544	Canola	cytosol	62.69	62.12
KRH46406	Soybean	cytosol	48.93	61.78
CDY28908	Canola	cytosol	62.39	61.63
Bra022153.1-P	Field mustard	cytosol	62.39	61.63
CDX77792	Canola	cytosol	62.69	61.38
CDY17710	Canola	cytosol	62.39	61.08
Bra024920.1-P	Field mustard	cytosol	62.39	61.08
Bra017468.1-P	Field mustard	cytosol	62.08	60.96
CDY41066	Canola	cytosol	62.08	60.96
EER96447	Sorghum	cytosol	62.39	60.9
KRH14208	Soybean	cytosol	59.94	60.87
CDY25949	Canola	cytosol	61.77	60.66
AT5G47730.1	Thale cress	cytosol	63.0	60.41
GSMUA_Achr1P09480_001	Banana	cytosol	61.16	59.7
KRH73923	Soybean	cytosol	36.39	56.67
KRH65859	Soybean	cytosol	24.16	55.24
KRH46400	Soybean	cytosol	43.43	52.79
KRG98457	Soybean	cytosol	63.0	50.24
KRH75081	Soybean	extracellular, mitochondrion	18.04	47.97
KRG82897	Soybean	cytosol	15.6	46.79
OQU88968	Sorghum	cytosol	21.41	17.03
OQU80990	Sorghum	cytosol	25.38	13.67
KXG40069	Sorghum	nucleus	25.99	13.49
KXG30865	Sorghum	cytosol	25.38	13.45
KXG22454	Sorghum	cytosol	25.38	13.41
KXG33199	Sorghum	cytosol	24.77	13.39
KXG29407	Sorghum	cytosol, nucleus, plastid	25.38	13.26
OQU85018	Sorghum	nucleus	24.77	13.21
EER96946	Sorghum	cytosol, nucleus, plastid	23.85	13.02
OQU84321	Sorghum	cytosol	22.32	12.94

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:8082915	UniProt:C5XXK4	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlants:EES04709	ProteinID:EES04709	ProteinID:EES04709.1	InterPro:IPR001251
InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF90
SMART:SM00516	SMART:SM01100	EnsemblPlantsGene:SORBI_3004G083000	SUPFAM:SSF46938	SUPFAM:SSF52087	unigene:Sbi.11100
UniParc:UPI0001A857BF	RefSeq:XP_002451733.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:6830176..6836788

Molecular Weight (calculated)

37454.0 Da

IEP (calculated)

7.402

GRAVY (calculated)

-0.454

Length

327 amino acids

Sequence
(BLAST)

001: MGADSEDAVK QLSLLMEQVE APLKRSFQNM HQGYLKETLV RFLKAREWNV SKAHKMIVDS LNWRIQNEID SVLERPIVPV DLYRSIRDSQ LIGLSGYTKE
101: GLPVFGIGVG HSTYDKASVH YYVQSHIQIN EYRDRIILPR LTQQFRRPVT QCIKVLDMTG LKLSALSQIK ILTSISTVDD LNYPEKTETY YVVNVPYIFS
201: ACWKVVKPLL QERTKKKVKV LTGCGRDELL KIMDYSALPH FCRHEGSGSS KHSSTDVDNC FSPDHPFHKE LYDHIKEQAS RRELIKMGSL HVSIPEPDPD
301: DAKIVEVIQA EFQKIGEQDE SPNGHKD

Best Arabidopsis Sequence Match ( AT1G55840.1 )
(BLAST)

001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI

Arabidopsis Description

At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.