CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0258000-01	Rice	cytosol	83.28	83.28
HORVU5Hr1G052230.2	Barley	cytosol	82.99	82.74
TraesCS5D01G174400.1	Wheat	cytosol	82.69	82.69
TraesCS5A01G170000.1	Wheat	cytosol	82.39	82.39
TraesCS5B01G166800.1	Wheat	cytosol	82.09	82.09
Zm00001d005118_P002	Maize	cytosol	87.46	74.37
AT1G55840.1	Thale cress	cytosol	63.28	65.23
CDY52903	Canola	cytosol	63.58	65.14
Bra038021.1-P	Field mustard	cytosol	63.28	64.83
CDY53762	Canola	cytosol	63.28	64.83
CDY10527	Canola	cytosol	62.39	64.31
CDY42389	Canola	cytosol	62.39	64.31
Bra030831.1-P	Field mustard	cytosol	62.09	64.0
EER90026	Sorghum	cytosol	62.69	63.64
EES04709	Sorghum	cytosol	60.9	62.39
OQU88968	Sorghum	cytosol	22.39	18.25
KXG30865	Sorghum	cytosol	27.76	15.07
OQU80990	Sorghum	cytosol	26.57	14.66
EER96946	Sorghum	cytosol, nucleus, plastid	25.97	14.52
KXG40069	Sorghum	nucleus	26.27	13.97
KXG29407	Sorghum	cytosol, nucleus, plastid	25.37	13.58
KXG22454	Sorghum	cytosol	25.07	13.57
OQU84321	Sorghum	cytosol	22.69	13.48
OQU85018	Sorghum	nucleus	24.48	13.38
KXG33199	Sorghum	cytosol	23.88	13.22

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:8062008	UniProt:C5X7H6	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlants:EER96447	ProteinID:EER96447	ProteinID:EER96447.1	InterPro:IPR001251
InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF142
SMART:SM00516	SMART:SM01100	EnsemblPlantsGene:SORBI_3002G148100	SUPFAM:SSF46938	SUPFAM:SSF52087	unigene:Sbi.5877
UniParc:UPI0001A83710	RefSeq:XP_002459926.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:37812109..37835896

Molecular Weight (calculated)

37926.7 Da

IEP (calculated)

8.815

GRAVY (calculated)

-0.372

Length

335 amino acids

Sequence
(BLAST)

001: MAATSEEVIK QLSALMEQLE EPLKTTFQNV HQGNLRGTLV RFLKAREWSV PKAHKMLMDC LNWRVQNEID SVLAKPILPS DLYRAIRDTL LVGLTGYSKQ
101: GQPIYAFGVG LSTFDKASVN YYVQSHIQMN EYRDRVVLPA ASKKFGRQIN TCLKVMDMTG LKLSALSQIK MLTMITTVDD LNYPEKTETY YIVNAPYVFS
201: ACWKVVKPLL QERTKKKIQV LYASGRDELL KVMDSESLPH FCKREGSGSS RDSLDGVDCY SYDHPFHQQL YNYMKQQSLN QYSAGPRKQG SVHVDVPSPG
301: LEEVKIAETI KAELQNLRGS NGLTHSFNSI QIEGP

Best Arabidopsis Sequence Match ( AT1G55840.1 )
(BLAST)

001: MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE
101: GLPVIAIGVG LSTYDKASVH YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD LNYPEKTETY YVVNVPYIFS
201: ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE
301: PDTEGNKIFD TLENEFQKLG NDQKI

Arabidopsis Description

At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.