CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053994_P008	Maize	cytosol, mitochondrion	94.73	89.04
Os02t0133100-01	Rice	cytosol	57.35	84.87
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	83.71	83.17
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	83.55	83.02
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	79.55	76.5
GSMUA_Achr1P12050_001	Banana	cytosol	72.04	72.04
GSMUA_Achr2P09690_001	Banana	cytosol	71.09	71.09
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	83.23	69.93
Bra030295.1-P	Field mustard	cytosol	31.47	69.61
CDY15888	Canola	cytosol	31.47	69.61
CDX99587	Canola	cytosol, mitochondrion	30.99	68.55
VIT_03s0038g04470.t01	Wine grape	cytosol	67.89	68.0
GSMUA_Achr10P...	Banana	cytosol	59.9	67.2
Solyc01g109870.2.1	Tomato	cytosol	66.61	66.72
PGSC0003DMT400001942	Potato	cytosol	66.29	66.4
Solyc10g053970.1.1	Tomato	cytosol	65.34	65.65
KRH29416	Soybean	cytosol	65.81	65.5
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	64.06	65.31
KRH24438	Soybean	cytosol	65.34	65.02
KRH60804	Soybean	cytosol	64.7	64.9
CDY12125	Canola	cytosol	63.58	64.61
CDX82040	Canola	cytosol	62.14	64.51
Bra010700.1-P	Field mustard	cytosol	63.58	64.4
CDX90316	Canola	cytosol	63.58	64.4
PGSC0003DMT400043545	Potato	cytosol	66.13	64.39
CDY13810	Canola	cytosol	64.22	63.61
AT2G21520.3	Thale cress	cytosol	64.54	63.42
Bra031196.1-P	Field mustard	cytosol	62.94	62.34
KRH51499	Soybean	cytosol	62.78	61.31
KXG22454	Sorghum	cytosol	57.99	58.64
KXG33199	Sorghum	cytosol	52.08	53.88
OQU85018	Sorghum	nucleus	50.8	51.88
OQU84321	Sorghum	cytosol	45.53	50.53
EER96946	Sorghum	cytosol, nucleus, plastid	46.01	48.08
KXG30865	Sorghum	cytosol	47.12	47.81
OQU80990	Sorghum	cytosol	45.69	47.12
KXG40069	Sorghum	nucleus	46.33	46.03
OQU88968	Sorghum	cytosol	25.72	39.17
EER90026	Sorghum	cytosol	13.42	25.45
EES04709	Sorghum	cytosol	13.26	25.38
EER96447	Sorghum	cytosol	13.58	25.37

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A194YMH9	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150	InterPro:IPR001251	InterPro:IPR036865
EnsemblPlants:KXG29407	ProteinID:KXG29407	ProteinID:KXG29407.1	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF145	SMART:SM00516	SMART:SM01100	EnsemblPlantsGene:SORBI_3004G031800
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0007F2E94D	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:2575353..2580613

Molecular Weight (calculated)

71556.0 Da

IEP (calculated)

8.368

GRAVY (calculated)

-0.541

Length

626 amino acids

Sequence
(BLAST)

001: MSGHLDRLAR PCFEGCSSHD ERRDHKSDFE VSEDEKKTRM GSLKKKAIDA STKIRHSLKK NRRKSGSRVL SVSIEDVRDL EELQAVEAFR QALLLDELLP
101: ARHDDYHMML RFLKARKFDI DKAKQMWIDM LQWRREYGTD TIVEDFEYTE LDTVLQYYPH GYHGVDRDGR PVYIERLGKV DPSKLMNVTT MDRYVRYHVK
201: EFERSFLIKF PACSLAAKRH IDSSTTILDV QGVGLKNFSK TARELIQRLQ KIDNDNYPET LYQMFIVNAG PGFRLLWNTV KSFLDPKTTA KIHVLGNKYQ
301: SKLLEIIDAS ELPEFLGGTC TCPEYGGCLK AEKGPWKDPN ILKIVQSGEV QCARQIVTIS NGEEKFITYA KPKHHTMRGS DTSTAESGSE ADDAISPKAL
401: RSYIPHPKLT PVREEVKMVR ATSFSTRLPE YDVPVVDKAV DATWKREQPR KTPFVPQDAD SSVKTASKPS DRSWDKIVAT LMACLMAIVM LVRSVKDLAT
501: RRLPYKGGSE ESYSALYPDS IQKEEFRPPS PIPGFAEADL FAAVLQRLGE LEEKVQMLQE KPSEMPCEKE ELLNAAVRRV DALEAELIVT KKALHEALIR
601: QEELLAYIDS KEIAKAQRKK KTMFCY

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.