Factsheet for GSMUA_Achr2P09690_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P12050_001	Banana	cytosol	89.14	89.14
GSMUA_Achr3P28830_001	Banana	nucleus	34.82	82.26
Bra030295.1-P	Field mustard	cytosol	34.03	75.27
CDY15888	Canola	cytosol	34.03	75.27
GSMUA_Achr10P...	Banana	cytosol	66.29	74.37
CDX99587	Canola	cytosol, mitochondrion	33.55	74.2
VIT_03s0038g04470.t01	Wine grape	cytosol	73.48	73.6
GSMUA_Achr9P22020_001	Banana	cytosol	73.48	72.9
KRH29416	Soybean	cytosol	71.57	71.22
KXG29407	Sorghum	cytosol, nucleus, plastid	71.09	71.09
KRH24438	Soybean	cytosol	71.25	70.91
PGSC0003DMT400001942	Potato	cytosol	70.61	70.72
KRH60804	Soybean	cytosol	70.45	70.67
Solyc01g109870.2.1	Tomato	cytosol	70.45	70.56
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	70.77	70.32
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	70.61	70.16
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	68.69	70.03
Os02t0133100-01	Rice	cytosol	47.12	69.74
CDX82040	Canola	cytosol	67.09	69.65
Solyc10g053970.1.1	Tomato	cytosol	69.01	69.34
CDY12125	Canola	cytosol	67.73	68.83
CDY13810	Canola	cytosol	69.17	68.51
CDX90316	Canola	cytosol	67.57	68.45
Bra010700.1-P	Field mustard	cytosol	67.41	68.28
Zm00001d015174_P005	Maize	cytosol	70.93	67.89
PGSC0003DMT400043545	Potato	cytosol	69.01	67.19
Bra031196.1-P	Field mustard	cytosol	67.73	67.09
AT2G21520.3	Thale cress	cytosol	68.21	67.03
KRH51499	Soybean	cytosol	68.05	66.46
Zm00001d053994_P008	Maize	cytosol, mitochondrion	70.29	66.07
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	68.05	65.44
GSMUA_Achr3P28840_001	Banana	mitochondrion	36.9	62.77
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	70.77	59.46
GSMUA_Achr4P09770_001	Banana	cytosol	41.69	57.24
GSMUA_Achr5P23630_001	Banana	cytosol	53.99	56.15
GSMUA_Achr1P25320_001	Banana	cytosol	58.47	55.96
GSMUA_Achr6P03210_001	Banana	cytosol	51.92	54.71
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	54.47	51.67
GSMUA_Achr9P01730_001	Banana	plastid	28.11	51.01
GSMUA_Achr7P06190_001	Banana	cytosol	46.17	50.09
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	48.4	49.67
GSMUA_Achr3P04130_001	Banana	nucleus	48.88	49.12
GSMUA_Achr5P04200_001	Banana	plastid	47.12	47.2
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	49.52	46.97
GSMUA_AchrUn_...	Banana	mitochondrion	24.12	40.7
GSMUA_Achr6P06610_001	Banana	mitochondrion	27.8	40.0
GSMUA_Achr3P12050_001	Banana	cytosol	14.86	27.84
GSMUA_Achr4P13090_001	Banana	cytosol	14.7	27.38
GSMUA_Achr7P06060_001	Banana	cytosol	14.54	27.33
GSMUA_Achr3P28070_001	Banana	cytosol	14.38	26.79
GSMUA_Achr1P19200_001	Banana	cytosol	14.38	26.71
GSMUA_Achr1P09480_001	Banana	cytosol	13.9	25.97

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr2G09690_001
EnsemblPlants:GSMUA_Achr2P09690_001	EnsemblPlants:GSMUA_Achr2T09690_001	InterPro:IPR001251	InterPro:IPR036865	UniProt:M0S6L0	PFAM:PF00650
PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF145	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI000295341D	SEG:seg

Description

Putative Sec14 cytosolic factor [Source:GMGC_GENE;Acc:GSMUA_Achr2G09690_001]

Coordinates

chr2:-:13135499..13144476

Molecular Weight (calculated)

71786.1 Da

IEP (calculated)

8.129

GRAVY (calculated)

-0.555

Length

626 amino acids

Sequence
(BLAST)

001: MSGPLDRFAR PCFEGFSSHD ERKERRSDIE NSEDERRTRI GSLKKKAINA STRFRHSLRK KNRRKSDSRV ISVSIEDIRN IEELEAVDAF RQSLILDELL
101: PAKHDDYHMM LRFLKARKFD VEKAKHMWAE MLQWRKDYGT DTIIEDFEYS ELNEVLQYYP HGYHGVDKEG RPVYIERLGK VDPSKLMQVT TMERYLRYHV
201: KEFERSFLIK FPACSIAAKK HIDSSTTILD VQGVSLKNFS KTARELIQRL QKIDNDNYPE TLHRMFIVNA GPGFRLLWNT VKSFLDPKTT SKIHVLGARY
301: QNKLLEIIEP SELPEFLGGC CTCAEQGGCL RSEKGPWKDP NILKMVLNGE AQCARQIVTV SNGEKKIIAY AKPQYPTIRG SDTSTAESGS EAEDITSPRA
401: VRNHISHPRL TPVHEEAKMV KAASFSSGFP EYDEYVPMVD KAVDGGWKKE ISNKRLYASK GQCSNPETHK SPQGVRAQII QFLVTIIVYL FTLVCSVSSC
501: VSKRLHNEVS ERDQHDPMFS VDPMVKEEYC HPSPAPAFTE ADLLSRLLIR LGELEEKVNI LQAKPSEMPS EKDELLNAAV CRVDALEAEL IATKKALHEA
601: LMRQDELLAY IDRQEEAKMR KKKFCF

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.