Factsheet for GSMUA_Achr1P12050_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P09690_001	Banana	cytosol	89.14	89.14
GSMUA_Achr3P28830_001	Banana	nucleus	35.78	84.53
Bra030295.1-P	Field mustard	cytosol	34.5	76.33
CDY15888	Canola	cytosol	34.5	76.33
GSMUA_Achr10P...	Banana	cytosol	67.09	75.27
CDX99587	Canola	cytosol, mitochondrion	34.03	75.27
VIT_03s0038g04470.t01	Wine grape	cytosol	74.92	75.04
KRH29416	Soybean	cytosol	73.16	72.81
Solyc01g109870.2.1	Tomato	cytosol	72.2	72.32
KXG29407	Sorghum	cytosol, nucleus, plastid	72.04	72.04
KRH24438	Soybean	cytosol	72.36	72.02
PGSC0003DMT400001942	Potato	cytosol	71.89	72.0
KRH60804	Soybean	cytosol	71.41	71.63
GSMUA_Achr9P22020_001	Banana	cytosol	71.89	71.32
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	71.25	70.79
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	71.09	70.63
CDX82040	Canola	cytosol	67.73	70.32
Os02t0133100-01	Rice	cytosol	47.44	70.21
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	68.37	69.71
Solyc10g053970.1.1	Tomato	cytosol	69.01	69.34
CDY13810	Canola	cytosol	69.81	69.15
Zm00001d015174_P005	Maize	cytosol	71.89	68.81
CDY12125	Canola	cytosol	67.25	68.34
CDX90316	Canola	cytosol	67.09	67.96
PGSC0003DMT400043545	Potato	cytosol	69.65	67.81
Bra010700.1-P	Field mustard	cytosol	66.93	67.8
Bra031196.1-P	Field mustard	cytosol	68.37	67.72
AT2G21520.3	Thale cress	cytosol	68.85	67.66
Zm00001d053994_P008	Maize	cytosol, mitochondrion	71.57	67.27
KRH51499	Soybean	cytosol	68.85	67.24
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	68.53	65.9
GSMUA_Achr3P28840_001	Banana	mitochondrion	36.9	62.77
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	71.73	60.27
GSMUA_Achr4P09770_001	Banana	cytosol	42.17	57.89
GSMUA_Achr1P25320_001	Banana	cytosol	59.11	56.57
GSMUA_Achr6P03210_001	Banana	cytosol	53.04	55.89
GSMUA_Achr5P23630_001	Banana	cytosol	53.51	55.65
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	55.59	52.73
GSMUA_Achr9P01730_001	Banana	plastid	28.43	51.59
GSMUA_Achr7P06190_001	Banana	cytosol	47.44	51.47
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	49.04	50.33
GSMUA_Achr3P04130_001	Banana	nucleus	49.68	49.92
GSMUA_Achr5P04200_001	Banana	plastid	48.08	48.16
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	49.52	46.97
GSMUA_AchrUn_...	Banana	mitochondrion	24.92	42.05
GSMUA_Achr6P06610_001	Banana	mitochondrion	28.27	40.69
GSMUA_Achr3P12050_001	Banana	cytosol	15.65	29.34
GSMUA_Achr7P06060_001	Banana	cytosol	15.34	28.83
GSMUA_Achr4P13090_001	Banana	cytosol	15.02	27.98
GSMUA_Achr1P19200_001	Banana	cytosol	15.02	27.89
GSMUA_Achr3P28070_001	Banana	cytosol	14.7	27.38
GSMUA_Achr1P09480_001	Banana	cytosol	13.58	25.37

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr1G12050_001
EnsemblPlants:GSMUA_Achr1P12050_001	EnsemblPlants:GSMUA_Achr1T12050_001	InterPro:IPR001251	InterPro:IPR036865	UniProt:M0RZ63	PFAM:PF00650
PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF145	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI000294B5EB	SEG:seg

Description

Putative Sec14 cytosolic factor [Source:GMGC_GENE;Acc:GSMUA_Achr1G12050_001]

Coordinates

chr1:+:9195217..9202288

Molecular Weight (calculated)

71437.6 Da

IEP (calculated)

8.374

GRAVY (calculated)

-0.567

Length

626 amino acids

Sequence
(BLAST)

001: MSGPLDRFAR PCFEGFSSHD ERKERKSDIE NSEDERRTRI GTLKKKAINA STKFRHSLKK KNRRKSDGRV VSVSIEDIRN IEELEAVDAF RQSLILDELL
101: PAKHDDYHMM LRFLKARKFD IEKAKHMWAE MLQWRKEYGT DTIVEDFEYS ELNEVLQYYP HGYHGVDKEG RPVYIERLGK VDPNKLMQVT TMERYVKYHV
201: KEFERSFLIK FPACSIAAKR HIDSSTTILD VQGVGLKNFS KTARELIQRL QKIDSDNYPE TLHRMFIVNA GPGFRLLWNT VKSFLDPKTT SKIHVLGTKY
301: QNKLLEIIEP SELPEFLGGS CTCADHGGCL KSEKGPWKDP NILKMVLSGE AQCARQIVAV SNGEGKIIAY AKPQNPTIRG SDTSTAESGS EAEDIASPKA
401: ARAHVSYPRL TPVHEEAKMV KAASFSSGFP QYDEYVPMVD KAVDGGWKKE VSNKRLSTSK GECSISKTHN TPQGVQARTI QFLVTIIMYL YTLVYSVIRC
501: VSKRLKNEVS EIDEHDPSFA ADPVPKEEFR PPSPAPVFTE ADLFSRLLRR LEELEEKVDT LKAKPSEMPS EKDELLNAAV CRVDALEAEL IVTKKALHEA
601: LMRQDELLAY IDRQEEAKMR KKKFCF

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.