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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G36490.1 GSMUA_Achr9P09250_001 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P23630_001 Banana cytosol 67.73 74.25
GSMUA_Achr6P03210_001 Banana cytosol 65.3 72.56
GSMUA_Achr3P28830_001 Banana nucleus 28.79 71.7
KRH28724 Soybean plastid 47.27 64.6
KRH76738 Soybean plastid 46.97 64.45
Os10t0122600-01 Rice cytosol, nucleus, plastid 57.27 63.21
Zm00001d016601_P006 Maize cytosol 57.27 62.48
OQU85018 Sorghum nucleus 57.73 62.15
Os02t0440900-00 Rice cytosol 56.06 61.87
HORVU2Hr1G082530.1 Barley cytosol 54.24 61.83
PGSC0003DMT400043532 Potato cytosol 51.82 61.4
TraesCS2B01G354800.2 Wheat nucleus 54.7 61.08
KRH24439 Soybean plastid 30.3 60.98
TraesCS2A01G327200.2 Wheat nucleus 54.09 60.41
TraesCS2D01G335700.2 Wheat nucleus 54.09 60.41
KRH69861 Soybean plastid 50.61 60.18
OQU84321 Sorghum cytosol 51.36 60.11
KRH08168 Soybean plastid 50.45 60.0
VIT_04s0023g02400.t01 Wine grape cytosol, nucleus, plastid 48.48 59.7
Solyc10g053900.1.1 Tomato cytosol, plastid 51.21 59.4
AT2G21540.2 Thale cress cytosol, nucleus, vacuole 49.09 59.12
PGSC0003DMT400001903 Potato cytosol, nucleus, plastid 51.36 59.06
Solyc01g109860.2.1 Tomato cytosol, nucleus, plastid 51.36 59.06
AT4G36490.1 Thale cress plastid 48.48 58.93
CDY15887 Canola cytosol 48.64 58.47
CDX99586 Canola cytosol 48.64 58.36
KRH51503 Soybean cytosol 50.61 58.29
KRH60806 Soybean cytosol 50.15 57.87
Bra030294.1-P Field mustard cytosol, nucleus, plastid 42.42 57.38
KRH29420 Soybean cytosol, nucleus, plastid 48.94 57.37
CDX75444 Canola cytosol 46.36 57.3
Bra034638.1-P Field mustard cytosol 46.97 56.99
CDX69071 Canola cytosol 46.06 56.93
AT4G34580.2 Thale cress cytosol 47.73 56.86
CDY12126 Canola cytosol 46.06 56.82
Bra010699.1-P Field mustard cytosol 46.06 56.61
CDX90317 Canola cytosol 46.06 56.61
AT2G18180.1 Thale cress plastid 47.73 56.45
VIT_03s0038g04480.t01 Wine grape cytosol 53.03 56.45
Os02t0133200-01 Rice plasma membrane 53.48 55.85
PGSC0003DMT400021690 Potato nucleus 50.91 55.63
AT4G39180.1 Thale cress cytosol 46.67 55.6
GSMUA_Achr1P12050_001 Banana cytosol 52.73 55.59
Solyc11g040280.1.1 Tomato cytosol 50.3 55.52
TraesCS6B01G125700.1 Wheat plastid 51.36 55.12
Bra011544.1-P Field mustard cytosol, plastid 41.21 54.95
TraesCS6A01G097200.1 Wheat plastid 50.91 54.81
CDY17469 Canola cytosol 47.27 54.64
CDY45318 Canola cytosol, plastid 41.36 54.6
GSMUA_Achr2P09690_001 Banana cytosol 51.67 54.47
GSMUA_Achr9P22020_001 Banana cytosol 51.97 54.36
TraesCS6D01G085200.1 Wheat plastid 50.61 54.31
Zm00001d015175_P002 Maize plastid 53.03 54.26
HORVU6Hr1G017580.5 Barley plastid 51.36 53.98
CDX89709 Canola cytosol, mitochondrion 36.97 53.63
Bra017663.1-P Field mustard cytosol, plastid 36.82 53.29
GSMUA_Achr4P09770_001 Banana cytosol 36.52 52.85
CDX76291 Canola cytosol 47.27 52.7
GSMUA_Achr10P... Banana cytosol 44.24 52.33
AT2G16380.1 Thale cress cytosol 43.33 52.29
GSMUA_Achr9P01730_001 Banana plastid 26.36 50.43
CDX69225 Canola mitochondrion 45.0 48.93
GSMUA_Achr1P25320_001 Banana cytosol 46.97 47.4
GSMUA_Achr7P06190_001 Banana cytosol 39.55 45.23
GSMUA_Achr3P11960_001 Banana cytosol, plastid 41.67 45.08
GSMUA_Achr3P04130_001 Banana nucleus 41.67 44.14
GSMUA_Achr5P04200_001 Banana plastid 41.21 43.52
GSMUA_Achr3P28840_001 Banana mitochondrion 24.24 43.48
GSMUA_Achr8P24430_001 Banana endoplasmic reticulum 43.33 43.33
GSMUA_AchrUn_... Banana mitochondrion 22.88 40.7
GSMUA_Achr6P06610_001 Banana mitochondrion 25.45 38.62
GSMUA_Achr3P12050_001 Banana cytosol 14.09 27.84
GSMUA_Achr1P19200_001 Banana cytosol 14.09 27.6
GSMUA_Achr7P06060_001 Banana cytosol 13.79 27.33
GSMUA_Achr4P13090_001 Banana cytosol 13.48 26.49
GSMUA_Achr3P28070_001 Banana cytosol 13.48 26.49
GSMUA_Achr1P09480_001 Banana cytosol 11.97 23.58
CDY02262 Canola cytosol, plastid 43.94 20.12
Bra013077.1-P Field mustard cytosol, plastid 43.94 19.88
Protein Annotations
Gene3D:1.10.8.20Gene3D:3.40.525.10MapMan:35.1InterPro:CRAL-TRIO_domInterPro:CRAL-TRIO_dom_sfInterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sfncoils:CoilEnsemblPlantsGene:GSMUA_Achr2G14280_001EnsemblPlants:GSMUA_Achr2P14280_001EnsemblPlants:GSMUA_Achr2T14280_001InterPro:IPR001251
InterPro:IPR036865UniProt:M0S7W9PFAM:PF00650PFAM:PF03765PRINTS:PR00180PFscan:PS50191
PANTHER:PTHR23324PANTHER:PTHR23324:SF55SMART:SM00516SMART:SM01100SUPFAM:SSF46938SUPFAM:SSF52087
UniParc:UPI0002962E10SEG:seg::::
Description
Putative Sec14 cytosolic factor [Source:GMGC_GENE;Acc:GSMUA_Achr2G14280_001]
Coordinates
chr2:-:16089274..16101312
Molecular Weight (calculated)
74259.1 Da
IEP (calculated)
7.605
GRAVY (calculated)
-0.400
Length
660 amino acids
Sequence
(BLAST)
001: MSGPLDQFPK SGLDGFHDEK RDRKSDAEIS EDERRTRIES LKKKAINAST KFRHSLIKRG RRSSKVMSVA IEDVRDAEEM QAVDAFRQIL ILEELLPSRH
101: DDYHTMLRFL KARKFDIEKT KQMWADMLQW RKEFGADTIL DDFDFKELND VMEYYPQGHH GVDKEGRPVY IERLGQVDAN KLMQVTTMDR YVKYHVKEFE
201: RSFVVKFPAC SIAAKRHIDQ STTIIDVQGV GCKQFTKAAR ELISRIQKID GDNYPETLCR MFIINAGSGF RLLWNTVKSF LDPKTTAKIH VLGNKYQSKL
301: LEVIDASELP EFLGGTCNCE GGCLHSDKGP WKDPEILKVV MVQSGVGSCG SQHLATGTEE KTISEDEVVY PKETILAVDD MYSVSPNILR SVIEHPHMSP
401: VREEEDSSDL QTAPEKFPTP YSNDDYVPIV DKAVDASSNK VPDEKLAIPN GSYALSGTYN GPDGFSNQIV SGVMAFVMGI VTMMRQMHQS QLPAPTVSAA
501: EFSSVLKRLG ELEEKVSVLS TKPAEMAPEK EEMLNAAVMR VDALEAELAA TKKALEDALV QQQEILAYID KKKKRKNKLS RVRLLLLCSV LSSAARQLHF
601: ASRSGKLPPL ALRRSRSSSS SARVSLELFR PRSHILSVTS FRISFSSLFL TNLCPKDPSF
Best Arabidopsis Sequence Match ( AT4G39170.1 )
(BLAST)
001: MSGPVDRFAI PCFEGILSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KRRKSDVRVS SVSIEDVRDV EELQAVDEFR QALVMEELLP
101: HKHDDYHMML RFLKARKFDI EKAKHMWADM IQWRKEFGTD TIIQDFQFEE IDEVLKYYPH GYHSVDKEGR PVYIERLGKV DPNKLMQVTT LDRYIRYHVK
201: EFERSFMLKF PACTIAAKKY IDSSTTILDV QGVGLKNFTK SARELITRLQ KIDGDNYPET LHQMFIINAG PGFRLLWSTV KSFLDPKTTS KIHVLGCKYQ
301: SKLLEIIDSS ELPEFLGGAC TCADQGGCML SDKGPWKNPE IVKMVLHGGA HRAKQVVKVL NSDGKVIAYA KPSYPWIKGS DTSTAESGSE AEDIVVSPKA
401: VKSYSHLRLT PVREEAKVGS GETSFAGSFA GYDEYVPMVD KAVDATWKVK PTAINRAPSK GAHMPPNVPK DHESFSARVL VTFMAFVMAI LTFFRTVSNR
501: VVTKQLPPPP SQPQIEGSAA AEEADLLNSV LKKLTELEEK IGALQSKPSE MPYEKEELLN AAVCRVDALE AELIATKKAL YEALMRQEEL LAYIDRQEAA
601: QHQKKNKRKQ MFCF
Arabidopsis Description
SFH6Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 [Source:UniProtKB/Swiss-Prot;Acc:F4JVA6]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.