CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017663.1-P	Field mustard	cytosol, plastid	91.0	99.78
AT4G34580.2	Thale cress	cytosol	84.4	76.17
CDX69071	Canola	cytosol	80.8	75.66
CDX75444	Canola	cytosol	80.8	75.66
CDY17469	Canola	cytosol	85.2	74.61
CDX76291	Canola	cytosol	85.4	72.13
CDX89709	Canola	cytosol, mitochondrion	60.8	66.81
CDY15888	Canola	cytosol	34.8	61.48
CDX99587	Canola	cytosol, mitochondrion	34.4	60.78
KRH24439	Soybean	plastid	36.4	55.49
CDY15887	Canola	cytosol	60.2	54.83
CDX99586	Canola	cytosol	60.2	54.73
CDY12126	Canola	cytosol	55.2	51.59
CDX90317	Canola	cytosol	55.4	51.58
KRH51503	Soybean	cytosol	57.8	50.44
PGSC0003DMT400043532	Potato	cytosol	55.8	50.09
KRH60806	Soybean	cytosol	56.8	49.65
KRH29420	Soybean	cytosol, nucleus, plastid	55.4	49.2
Solyc10g053900.1.1	Tomato	cytosol, plastid	55.8	49.03
PGSC0003DMT400001903	Potato	cytosol, nucleus, plastid	55.0	47.91
Solyc01g109860.2.1	Tomato	cytosol, nucleus, plastid	54.6	47.56
PGSC0003DMT400021690	Potato	nucleus	57.4	47.52
Solyc11g040280.1.1	Tomato	cytosol	56.4	47.16
HORVU2Hr1G082530.1	Barley	cytosol	54.0	46.63
TraesCS2D01G335700.2	Wheat	nucleus	54.2	45.85
CDY11954	Canola	cytosol	17.8	45.64
TraesCS2B01G354800.2	Wheat	nucleus	53.8	45.52
TraesCS2A01G327200.2	Wheat	nucleus	53.8	45.52
OQU84321	Sorghum	cytosol	51.2	45.39
GSMUA_Achr5P23630_001	Banana	cytosol	54.6	45.35
GSMUA_Achr6P03210_001	Banana	cytosol	53.8	45.29
Zm00001d016601_P006	Maize	cytosol	53.8	44.46
Os02t0440900-00	Rice	cytosol	53.0	44.31
Os10t0122600-01	Rice	cytosol, nucleus, plastid	52.8	44.15
OQU85018	Sorghum	nucleus	53.6	43.72
CDX90316	Canola	cytosol	52.8	42.72
CDY12125	Canola	cytosol	52.6	42.69
CDX69225	Canola	mitochondrion	50.4	41.52
CDX82040	Canola	cytosol	50.0	41.46
TraesCS6A01G097200.1	Wheat	plastid	50.8	41.44
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	54.6	41.36
Os02t0133200-01	Rice	plasma membrane	52.0	41.14
TraesCS6D01G085200.1	Wheat	plastid	50.6	41.14
TraesCS6B01G125700.1	Wheat	plastid	50.2	40.81
Zm00001d015175_P002	Maize	plastid	52.6	40.78
HORVU6Hr1G017580.5	Barley	plastid	51.2	40.76
CDY39363	Canola	cytosol	48.0	40.54
CDY13810	Canola	cytosol	50.2	39.72
CDY29415	Canola	nucleus	47.6	38.7
CDY11957	Canola	cytosol	34.2	38.43
CDX68133	Canola	cytosol	46.4	38.16
CDX85889	Canola	cytosol	46.2	38.06
CDY17730	Canola	cytosol	29.4	36.57
CDX77773	Canola	cytosol	29.4	36.12
CDY52084	Canola	cytosol	38.6	32.88
CDY50018	Canola	vacuole	40.4	31.61
CDX77382	Canola	cytosol	38.8	31.34
CDY51966	Canola	cytosol	36.8	30.92
CDY42378	Canola	nucleus	39.6	30.79
CDY36780	Canola	plastid	35.0	30.7
CDY10540	Canola	cytosol, nucleus, plastid	39.4	30.64
CDY17397	Canola	cytosol	36.4	30.59
CDY51073	Canola	mitochondrion, nucleus	31.2	30.53
CDY02262	Canola	cytosol, plastid	67.6	23.46
CDY52903	Canola	cytosol	14.6	22.32
CDY53762	Canola	cytosol	14.6	22.32
CDY10527	Canola	cytosol	14.4	22.15
CDY28908	Canola	cytosol	14.6	22.05
CDY42389	Canola	cytosol	14.2	21.85
CDX77792	Canola	cytosol	14.4	21.56
CDY40544	Canola	cytosol	14.0	21.21
CDY41066	Canola	cytosol	14.0	21.02
CDY25949	Canola	cytosol	14.0	21.02
CDY17710	Canola	cytosol	14.0	20.96
CDY36781	Canola	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	GO:A0A078I824	UniProt:A0A078I824	EnsemblPlants:CDY45318
ProteinID:CDY45318	ProteinID:CDY45318.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf
EnsemblPlantsGene:GSBRNA2T00081772001	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF77	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI0004EDCB8F	SEG:seg	:	:	:

Description

BnaA03g52910DBnaA03g52910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I824]

Coordinates

chrLK032620:+:97423..100134

Molecular Weight (calculated)

57117.9 Da

IEP (calculated)

8.504

GRAVY (calculated)

-0.521

Length

500 amino acids

Sequence
(BLAST)

001: MGSLKKKALS ASNRFKNSIK KKGRRSRVMS VPIENDIDAE DLQSIDVFRQ VLVLDELLPY KLDDLHMMLR FLRARKFDIE KAKQMWKDMI QWRKDFGADT
101: IIEDFEFKEI DEVMKYYPQG YHGIDKEGRP VYIERLGQID ANKLLQVTTM DRYVKYHVKE FEKTFNIKFP ACSVAANKHI DQSTTIFDVQ GVGMKNFSKS
201: ARELLQSLLK IDNDNYHETL NRMFIINAGS GFRLLWSTVK SFLDPKTTAK IHVLGNKYHS KLLEVIDASE LPEFFGGACT CEDKGGCMRS DKGPWNDPEV
301: LKVLNISHMA INREVKCAPI SEDEHEHVDQ GRSISVPKSV ERYNKKKDED NAQEEQITTI DKSMDMSRYQ KAENDPLSKG LECYVRKGAP NKGGGSLVGG
401: VMAFVMGIVA MVRLSKDVPH KLTEAAIYGN SVCYEESRSK KTKVQFATPV SSSEYMLMTK RMAELEEKWM SLDLKPANIE SEKEEKLQAA LTVFKCLSKS

Best Arabidopsis Sequence Match ( AT4G34580.1 )
(BLAST)

001: MAETKPEIEM SEEERKIVKI SSLKKKAINA SNRFKNSFKK KGRRSSSRVM SVPIEDDIDA EDLQALDAFR QALILDELLP SKLDDLHMML RFLRARKFDI
101: EKAKQMWSDM IQWRKDFGAD TIIEDFDFEE IDEVMKHYPQ GYHGVDKEGR PVYIERLGQI DANKLLQVTT MDRYVKYHVK EFEKTFKVKF PSCSVAANKH
201: IDQSTTILDV QGVGLKNFSK SARELLQRLC KIDNENYPET LNRMFIINAG SGFRLLWSTV KSFLDPKTTA KIHVLGNKYH SKLLEVIDAS ELPEFFGGAC
301: TCEDKGGCMR SDKGPWNDPE VLKIAINREA KCSPISEDEH KHVDQGRSTS GFESLERIKK KTDEDNVYEK QIATIDKSMD MAWLAKTQKA ENFPISKGLE
401: CYVRKGAPKK GDGLLVGGVM AFVMGIVAMV RLSKDVPRKL TEAALYGNSV CYEESTKSKQ NQGQFAAPVS SSEYMLMVKR MAELEDKCMF LDLKPAHVES
501: EKEEKLQAAL NRVQVLEQEL TETKKALEEA LVSQKEILAY IEKKKKKKKL FFGF

Arabidopsis Description

SFH1SRH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V672]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.