CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015089.1-P	Field mustard	cytosol	85.62	99.07
CDY52084	Canola	cytosol	90.63	95.57
AT3G24840.3	Thale cress	cytosol	77.54	82.76
CDY15888	Canola	cytosol	24.72	54.06
KRG99773	Soybean	cytosol, nucleus, plastid	51.86	54.04
VIT_07s0005g06640.t01	Wine grape	endoplasmic reticulum	53.15	53.85
CDX99587	Canola	cytosol, mitochondrion	24.39	53.36
KRH46724	Soybean	cytosol, nucleus, plastid	50.57	52.69
Solyc09g060090.2.1	Tomato	cytosol	49.76	51.94
PGSC0003DMT400045517	Potato	cytosol	49.6	51.77
GSMUA_Achr9P01730_001	Banana	plastid	27.63	49.57
CDY11957	Canola	cytosol	32.63	45.39
CDX90317	Canola	cytosol	36.51	42.09
CDY12126	Canola	cytosol	36.35	42.06
CDY11954	Canola	cytosol	13.25	42.05
GSMUA_Achr6P06610_001	Banana	mitochondrion	29.4	41.84
CDX75444	Canola	cytosol	35.22	40.82
CDX82040	Canola	cytosol	39.26	40.3
CDX69071	Canola	cytosol	34.73	40.26
CDY15887	Canola	cytosol	35.7	40.26
CDX99586	Canola	cytosol	35.7	40.18
CDX89709	Canola	cytosol, mitochondrion	29.24	39.78
CDX68133	Canola	cytosol	38.77	39.47
CDX90316	Canola	cytosol	39.26	39.32
CDY50018	Canola	vacuole	40.55	39.28
CDY13810	Canola	cytosol	40.06	39.24
CDY12125	Canola	cytosol	38.93	39.12
CDX85889	Canola	cytosol	38.29	39.04
CDY45318	Canola	cytosol, plastid	31.34	38.8
CDY51073	Canola	mitochondrion, nucleus	31.99	38.75
CDY42378	Canola	nucleus	40.06	38.57
CDY39363	Canola	cytosol	36.83	38.51
CDY10540	Canola	cytosol, nucleus, plastid	39.74	38.26
CDY17469	Canola	cytosol	34.9	37.83
CDY29415	Canola	nucleus	37.0	37.24
CDY51966	Canola	cytosol	35.7	37.14
CDY17730	Canola	cytosol	24.07	37.06
CDY17397	Canola	cytosol	35.38	36.81
CDY36780	Canola	plastid	33.76	36.67
CDX76291	Canola	cytosol	34.9	36.49
CDX77773	Canola	cytosol	23.91	36.36
CDX69225	Canola	mitochondrion	34.9	35.58
CDY52903	Canola	cytosol	14.05	26.61
CDY53762	Canola	cytosol	14.05	26.61
CDY40544	Canola	cytosol	13.89	26.06
CDY28908	Canola	cytosol	13.89	25.98
CDY42389	Canola	cytosol	13.25	25.23
CDY10527	Canola	cytosol	13.25	25.23
CDY41066	Canola	cytosol	13.57	25.23
CDY25949	Canola	cytosol	13.57	25.23
CDX77792	Canola	cytosol	12.76	23.65
CDY17710	Canola	cytosol	12.6	23.35
CDY02262	Canola	cytosol, plastid	34.41	14.78
CDY36781	Canola	extracellular	0.32	1.19

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlants:CDX77382	ProteinID:CDX77382	ProteinID:CDX77382.1
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GSBRNA2T00128208001
InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF100	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0004EE10C5
SEG:seg	:	:	:	:	:

Description

BnaA07g05200D

Coordinates

chrLK031811:-:105026..110827

Molecular Weight (calculated)

70811.0 Da

IEP (calculated)

8.310

GRAVY (calculated)

-0.589

Length

619 amino acids

Sequence
(BLAST)

001: MCTSLTKKNK RNEANFDSYV GDFTEVDTPE IGFKSLGEIL SVPETDKGKS KDIIDNSEDE KILPRPPRGS RSLKKKAIKA STKLTHSLRK RGKRVADQYA
101: AIVIEDVRDA EEEKAVYAFR EALVSLDLLP PRHDDYHTML RFLKARRFDH DKTVHMWEEM LKWRRENGVD TIMQDFVYEE YEEVQQYYPH GYHGVDREGR
201: PVYIERLGKV DPGKLMKVTS LERFLRYHVQ GFEKTFSEKF PACSIAAKRH INSSTTIIDV QGVSWMKLRK LAQDLVMRMQ KIDGDNYPET LNQMYIVNAG
301: NGFSIIWSTV KGFLDPKTSS KIHVLKNKDR SHLLEIIDPS ELPDFLGGNC TCANEGGCMR FNKGPWNDPE IMKLVRLRDA TYKVKEIELP ENGEVAKLFA
401: LPHVNTEISL PDGGQVRVRE SHFEHDTSAQ LSHQLEAVGT GRIVQSDSTN QLSSNLTEER GLKKSLQKVA SSLARFIFQL VASLCLMFRI LGSLVNKKPE
501: NQLRPPVLDS PPPPPPPTQL LQRGESLHPC WQRLQNLESM VTVLFDKPTN IPQEKEDILR DSLDRIKGIE QDLQKTKKAL LLTASKQLEL AESFESLKES
601: TSMGMRSCWP RHCRNFQVE

Best Arabidopsis Sequence Match ( AT3G24840.2 )
(BLAST)

001: MPALGEILLV PETDKGKSKD YIEVSEDEKI TRTRSRSLKK KAIKASNKLT HSLRKRGKRV ADQYAPIVIE DVRDEEEEKA VNVFRKALVS LDLLPPRHDD
101: YHTMLRFLKA RRFDLEKTVQ MWEEMLKWRK ENGVDTIIQD FVYDEYEEVQ QYYPHGYHGV DREGRPVYIE RLGKIDPGKL MKVTTLERFL RYHVQGFEKT
201: FSEKFPACSI AAKRHINSST TIIDVHGVSW MSFRKLAQDL VMRMQKIDGD NYPETLNQMY IINAGNGFKL VWNTVKGFLD PKTTSKIHVL GNKYRSHLLE
301: IIDPSELPEF LGGNCKCAHE GGCMRFNKGP WNDPEIMKLV RSRDAMYKPK EMGLLENGEV AKLFSLRHVN TDMSSPDGGH VRERESHPEH DKRAQLSNQA
401: EAVGVGRMEQ SDSTSPLPNN LAVERSLTTS LQKVASFLAR FILQLLGSLC LMFRILGRLV NKQPENQLRP ELSVSVSQQQ VPPPQVHPCW LRLQNLETMV
501: TVLCDKPSSI PQEKEDILRD SLDRIKSIEQ DLQKTKKALF LTASKQIELA ECFENLKESS STGMRSCWPR HCRNFQAET

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.