Factsheet for GSMUA_Achr9P01730_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P06610_001	Banana	mitochondrion	70.72	56.09
GSMUA_Achr3P28830_001	Banana	nucleus	34.49	44.91
GSMUA_Achr4P09770_001	Banana	cytosol	51.3	38.82
GSMUA_AchrUn_...	Banana	mitochondrion	36.52	33.96
GSMUA_Achr7P06190_001	Banana	cytosol	53.33	31.89
KRG99773	Soybean	cytosol, nucleus, plastid	53.62	31.14
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	54.78	30.98
GSMUA_Achr10P...	Banana	cytosol	49.86	30.82
KRH46724	Soybean	cytosol, nucleus, plastid	51.88	30.13
VIT_07s0005g06640.t01	Wine grape	endoplasmic reticulum	53.33	30.11
AT3G24840.3	Thale cress	cytosol	50.14	29.83
PGSC0003DMT400045517	Potato	cytosol	51.01	29.68
Solyc09g060090.2.1	Tomato	cytosol	50.72	29.51
CDY52084	Canola	cytosol	49.28	28.96
GSMUA_Achr6P03210_001	Banana	cytosol	49.86	28.96
GSMUA_Achr3P04130_001	Banana	nucleus	52.17	28.89
GSMUA_Achr5P23630_001	Banana	cytosol	49.86	28.57
GSMUA_Achr1P12050_001	Banana	cytosol	51.59	28.43
GSMUA_Achr5P04200_001	Banana	plastid	51.3	28.32
GSMUA_Achr2P09690_001	Banana	cytosol	51.01	28.11
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	53.04	27.73
CDX77382	Canola	cytosol	49.57	27.63
GSMUA_Achr9P22020_001	Banana	cytosol	49.57	27.1
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	50.43	26.36
GSMUA_Achr1P25320_001	Banana	cytosol	46.96	24.77
Bra015089.1-P	Field mustard	cytosol	37.97	24.49
GSMUA_Achr7P06060_001	Banana	cytosol	22.03	22.82
GSMUA_Achr3P12050_001	Banana	cytosol	22.03	22.75
GSMUA_Achr1P19200_001	Banana	cytosol	21.74	22.26
GSMUA_Achr3P28070_001	Banana	cytosol	20.87	21.43
GSMUA_Achr1P09480_001	Banana	cytosol	20.29	20.9
GSMUA_Achr4P13090_001	Banana	cytosol	20.29	20.83
GSMUA_Achr3P28840_001	Banana	mitochondrion	14.2	13.32

Protein Annotations

EnsemblPlants:GSMUA_Achr9P01730_001	EnsemblPlants:GSMUA_Achr9T01730_001	EnsemblPlantsGene:GSMUA_Achr9G01730_001	Gene3D:1.10.8.20	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324
PANTHER:PTHR23324:SF100	PFAM:PF00650	PFscan:PS50191	SEG:seg	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000294DC77	UniProt:M0TWN0	MapMan:35.1	:

Description

Putative Sec14 cytosolic factor [Source:GMGC_GENE;Acc:GSMUA_Achr9G01730_001]

Coordinates

chr9:-:1341834..1346897

Molecular Weight (calculated)

39099.8 Da

IEP (calculated)

8.215

GRAVY (calculated)

-0.381

Length

345 amino acids

Sequence
(BLAST)

001: MIPSSSRSSA SDGARKRGRG KRVDSSASAT ASACDWTDAS SEEEERAVGV FRKALIDRNL LPARHDDYHT MKRFLKARGF NIEKAIRMWS EMLQWRMDFG
101: ADTILQDFVF SELDEVLRYY PHGFHGVDKD GRPVYIERLG MVDPNKLLTV TTVERFIKYH VQVIEKILSE KYPACSLAAK RHIDTMTTIL DVQGVNWMSV
201: GKLARDVVLR IQKIDSDNYP EILHKLFIVN AGSGFRLLWN TIKGLIDPRT TAKIVVLGDR YQNTLLELIE MSQLPDFLGG SCTCSNEGGC LTSNKGPWSD
301: PQFMDAVHSG ITSSRNRDNP IDEKKLTRQV KSHLFQVLDE FQYSG

Best Arabidopsis Sequence Match ( AT3G24840.2 )
(BLAST)

001: MPALGEILLV PETDKGKSKD YIEVSEDEKI TRTRSRSLKK KAIKASNKLT HSLRKRGKRV ADQYAPIVIE DVRDEEEEKA VNVFRKALVS LDLLPPRHDD
101: YHTMLRFLKA RRFDLEKTVQ MWEEMLKWRK ENGVDTIIQD FVYDEYEEVQ QYYPHGYHGV DREGRPVYIE RLGKIDPGKL MKVTTLERFL RYHVQGFEKT
201: FSEKFPACSI AAKRHINSST TIIDVHGVSW MSFRKLAQDL VMRMQKIDGD NYPETLNQMY IINAGNGFKL VWNTVKGFLD PKTTSKIHVL GNKYRSHLLE
301: IIDPSELPEF LGGNCKCAHE GGCMRFNKGP WNDPEIMKLV RSRDAMYKPK EMGLLENGEV AKLFSLRHVN TDMSSPDGGH VRERESHPEH DKRAQLSNQA
401: EAVGVGRMEQ SDSTSPLPNN LAVERSLTTS LQKVASFLAR FILQLLGSLC LMFRILGRLV NKQPENQLRP ELSVSVSQQQ VPPPQVHPCW LRLQNLETMV
501: TVLCDKPSSI PQEKEDILRD SLDRIKSIEQ DLQKTKKALF LTASKQIELA ECFENLKESS STGMRSCWPR HCRNFQAET

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.