Factsheet for GSMUA_Achr9P22020_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P28830_001	Banana	nucleus	39.14	93.21
GSMUA_Achr2P09690_001	Banana	cytosol	72.9	73.48
GSMUA_Achr3P28840_001	Banana	mitochondrion	42.47	72.83
VIT_03s0038g04470.t01	Wine grape	cytosol	71.32	72.0
GSMUA_Achr1P12050_001	Banana	cytosol	71.32	71.89
Bra030295.1-P	Field mustard	cytosol	32.17	71.73
CDY15888	Canola	cytosol	32.17	71.73
CDX99587	Canola	cytosol, mitochondrion	31.7	70.67
KRH29416	Soybean	cytosol	69.89	70.11
KRH24438	Soybean	cytosol	69.57	69.79
Solyc01g109870.2.1	Tomato	cytosol	68.46	69.12
PGSC0003DMT400001942	Potato	cytosol	67.83	68.48
KRH60804	Soybean	cytosol	67.51	68.27
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	66.09	67.92
Os05t0545000-01	Rice	cytosol, nucleus, plastid	65.77	67.7
Solyc10g053970.1.1	Tomato	cytosol	66.72	67.58
CDX82040	Canola	cytosol	64.03	67.0
CDY12125	Canola	cytosol	65.29	66.88
Bra010700.1-P	Field mustard	cytosol	65.29	66.67
CDX90316	Canola	cytosol	65.13	66.5
CDY13810	Canola	cytosol	66.56	66.46
PGSC0003DMT400043545	Potato	cytosol	67.04	65.79
AT2G21520.3	Thale cress	cytosol	66.4	65.78
KXG22454	Sorghum	cytosol	64.5	65.75
GSMUA_Achr10P...	Banana	cytosol	58.0	65.59
Bra031196.1-P	Field mustard	cytosol	65.13	65.03
Zm00001d009439_P004	Maize	cytosol	63.55	64.89
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	63.23	64.25
Zm00001d038880_P001	Maize	cytosol	62.6	63.92
KRH51499	Soybean	cytosol	64.82	63.81
KXG33199	Sorghum	cytosol	56.58	59.01
Zm00001d011663_P003	Maize	cytosol	56.74	58.31
TraesCS3D01G255900.4	Wheat	cytosol	56.42	57.89
GSMUA_Achr1P25320_001	Banana	cytosol	59.75	57.65
TraesCS3B01G287000.6	Wheat	cytosol	57.21	56.58
TraesCS3A01G255000.6	Wheat	cytosol	57.05	56.43
GSMUA_Achr6P03210_001	Banana	cytosol	52.93	56.23
GSMUA_Achr4P09770_001	Banana	cytosol	40.57	56.14
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	63.23	56.04
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	63.07	55.74
Zm00001d043733_P002	Maize	mitochondrion	48.34	55.56
GSMUA_Achr5P23630_001	Banana	cytosol	52.46	54.98
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	63.07	54.6
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	57.21	53.96
Os01t0701900-01	Rice	nucleus	55.78	52.46
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	54.36	51.97
GSMUA_Achr9P01730_001	Banana	plastid	27.1	49.57
GSMUA_Achr7P06190_001	Banana	cytosol	45.17	49.39
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	46.43	48.03
GSMUA_Achr3P04130_001	Banana	nucleus	46.28	46.87
GSMUA_Achr5P04200_001	Banana	plastid	45.8	46.24
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	47.39	45.3
GSMUA_AchrUn_...	Banana	mitochondrion	25.83	43.94
GSMUA_Achr6P06610_001	Banana	mitochondrion	26.47	38.39
GSMUA_Achr3P12050_001	Banana	cytosol	14.74	27.84
GSMUA_Achr4P13090_001	Banana	cytosol	14.42	27.08
GSMUA_Achr7P06060_001	Banana	cytosol	14.26	27.03
GSMUA_Achr3P28070_001	Banana	cytosol	14.26	26.79
GSMUA_Achr1P19200_001	Banana	cytosol	14.26	26.71
GSMUA_Achr1P09480_001	Banana	cytosol	13.31	25.07

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr9G22020_001
EnsemblPlants:GSMUA_Achr9P22020_001	EnsemblPlants:GSMUA_Achr9T22020_001	InterPro:IPR001251	InterPro:IPR036865	UniProt:M0U2G1	PFAM:PF00650
PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF145	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix	UniParc:UPI000296CA65	SEG:seg

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G22020_001]

Coordinates

chr9:-:27153306..27162059

Molecular Weight (calculated)

72592.1 Da

IEP (calculated)

8.378

GRAVY (calculated)

-0.568

Length

631 amino acids

Sequence
(BLAST)

001: MSGPLDRFAR PCFEGFSSHD EKKERKSDVE NSEDERRTRI GSLKKKAISA STRFRHSLRR KSRKKLDTRV SSVSIEDIRD IEELRAVDSF RQSLIQDELL
101: PSKHDDYHMM LRFLKARKFD TEKAKHMWSE MLKWRQDFGA DTIIEDFDYT EIEEVLKYYP QGYHGVDKEG RPVYIEMLGK VDANKLMQVT TMDRYIKYHV
201: KEFERCFLLR FPACSIAAKR HIDSSTTILD VQGVGLKNFT KAARELIIRL QKIDNDNYPE TLCRMFIINA GSGFKLLWNT VKSFLDPKTT SKIHVLGTKY
301: QNKLLEVIDS SELPEFFGGC CTCTEYGGCL RSDRGPWKDP NILKMILNGE AQCARKIVTV SNSEGKIIAY AKPRYPAIKG SDTSTAESGS EPEDIGYSRR
401: PINYIHKPQL TPVHEEVKNM QAKMLGKARV SGGSSEYEDC VPMVDKAVDA AWKNQNSSSV QPSSEGRFRL FDMSLPSNGI HVQVITWLTA FIMTLYAMFC
501: SVTSRVTKKL PEKTHEFDLY SPEYDLDHMP KEEFRPPSPS PFYKEVDLLS SVLKRLGELE EKVDELQAKP SKMPYEKEEL LDAAVRRVDA LEAELIATKK
601: ALYEALIGQE ELLAYIDQQR QAKFRKKKFC F

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.