Factsheet for GSMUA_Achr4P09770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031251_P001	Maize	cytosol, mitochondrion	20.83	73.64
Zm00001d012531_P001	Maize	mitochondrion	21.05	73.28
Zm00001d039981_P001	Maize	cytosol	19.52	72.36
GSMUA_Achr3P28830_001	Banana	nucleus	37.5	64.53
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	81.36	56.21
Zm00001d043774_P001	Maize	cytosol	10.31	55.29
GSMUA_Achr5P04200_001	Banana	plastid	73.68	53.76
GSMUA_Achr3P04130_001	Banana	nucleus	72.59	53.13
GSMUA_Achr9P01730_001	Banana	plastid	38.82	51.3
GSMUA_Achr7P06190_001	Banana	cytosol	63.82	50.43
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	65.57	49.02
CDY11954	Canola	cytosol	20.61	48.21
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	20.61	47.47
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	30.26	46.46
KXG30865	Sorghum	cytosol	61.84	45.7
Zm00001d051674_P037	Maize	cytosol	61.18	45.59
Zm00001d017876_P018	Maize	cytosol	61.62	45.54
Os02t0721800-01	Rice	cytosol	60.96	45.42
Zm00001d045670_P001	Maize	cytosol	18.64	45.21
TraesCS7D01G238000.2	Wheat	cytosol	58.99	44.46
TraesCS6D01G265200.1	Wheat	cytosol	60.31	44.43
TraesCS6B01G313500.1	Wheat	cytosol	60.09	44.26
TraesCS6A01G284800.1	Wheat	cytosol	60.09	44.19
HORVU6Hr1G071770.19	Barley	cytosol	59.87	44.17
KRH45371	Soybean	cytosol	42.32	43.86
OQU80990	Sorghum	cytosol	57.89	43.49
EER96946	Sorghum	cytosol, nucleus, plastid	56.8	43.24
Zm00001d005995_P003	Maize	nucleus	56.8	43.24
Zm00001d045718_P001	Maize	cytosol	23.9	43.08
VIT_19s0015g01160.t01	Wine grape	cytosol	58.11	42.67
Os08t0497300-01	Rice	cytosol, plastid	56.36	42.55
GSMUA_Achr1P12050_001	Banana	cytosol	57.89	42.17
Os09t0481100-01	Rice	nucleus	56.36	42.06
KRH62508	Soybean	cytosol	56.8	41.77
GSMUA_Achr2P09690_001	Banana	cytosol	57.24	41.69
GSMUA_AchrUn_...	Banana	mitochondrion	33.77	41.51
KRH56402	Soybean	cytosol	56.36	41.45
Zm00001d014589_P001	Maize	cytosol	8.77	41.24
HORVU7Hr1G048880.11	Barley	mitochondrion	58.33	41.11
TraesCS7B01G135600.2	Wheat	plastid	59.65	40.78
GSMUA_Achr9P22020_001	Banana	cytosol	56.14	40.57
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	59.43	40.39
CDY11957	Canola	cytosol	39.25	40.22
AT1G55690.4	Thale cress	nucleus	54.82	40.0
PGSC0003DMT400057292	Potato	nucleus	54.17	39.97
Solyc07g066090.2.1	Tomato	nucleus	54.17	39.84
GSMUA_Achr6P06610_001	Banana	mitochondrion	37.94	39.77
GSMUA_Achr6P03210_001	Banana	cytosol	51.75	39.73
Zm00001d031316_P020	Maize	cytosol	56.14	39.69
KRH07662	Soybean	cytosol	53.73	39.58
CDY10540	Canola	cytosol, nucleus, plastid	55.7	39.5
CDY42378	Canola	nucleus	55.7	39.5
GSMUA_Achr5P23630_001	Banana	cytosol	51.54	39.04
GSMUA_Achr10P...	Banana	cytosol	47.59	38.89
Solyc10g005740.1.1	Tomato	nucleus	51.75	38.19
CDY50018	Canola	vacuole	52.85	37.72
Bra030841.1-P	Field mustard	nucleus	49.34	37.56
Zm00001d010393_P001	Maize	plastid	29.61	37.09
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	52.85	36.52
AT5G56160.1	Thale cress	cytosol	45.61	36.05
Zm00001d037983_P001	Maize	cytosol	18.42	35.59
Zm00001d052840_P016	Maize	plastid	56.36	35.45
PGSC0003DMT400022405	Potato	cytosol, nucleus	44.96	35.22
CDY51966	Canola	cytosol	45.83	35.13
Bra002841.1-P	Field mustard	cytosol	40.13	34.99
CDY17397	Canola	cytosol	44.96	34.45
CDY51073	Canola	mitochondrion, nucleus	38.38	34.25
GSMUA_Achr1P25320_001	Banana	cytosol	48.68	33.95
CDY36780	Canola	plastid	40.57	32.46
Zm00001d047488_P001	Maize	nucleus	8.99	25.62
GSMUA_Achr7P06060_001	Banana	cytosol	17.98	24.62
GSMUA_Achr3P12050_001	Banana	cytosol	17.98	24.55
GSMUA_Achr3P28070_001	Banana	cytosol	17.76	24.11
GSMUA_Achr3P28840_001	Banana	mitochondrion	19.3	23.91
GSMUA_Achr1P19200_001	Banana	cytosol	17.32	23.44
GSMUA_Achr1P09480_001	Banana	cytosol	17.11	23.28
GSMUA_Achr4P13090_001	Banana	cytosol	17.11	23.21
Bra038012.1-P	Field mustard	cytosol	53.07	22.87
Bra028944.1-P	Field mustard	plastid	32.68	21.41
Zm00001d035370_P003	Maize	plastid	14.47	16.18
Zm00001d005778_P001	Maize	plastid	8.55	13.88
CDY36781	Canola	extracellular	0.0	0.0
Bra002840.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	EnsemblPlantsGene:GSMUA_Achr4G09770_001	EnsemblPlants:GSMUA_Achr4P09770_001	EnsemblPlants:GSMUA_Achr4T09770_001	InterPro:IPR001251
InterPro:IPR036865	UniProt:M0SMJ4	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF100	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI000294F04D	SEG:seg	:	:	:	:

Description

Putative Sec14 cytosolic factor [Source:GMGC_GENE;Acc:GSMUA_Achr4G09770_001]

Coordinates

chr4:+:7070902..7080258

Molecular Weight (calculated)

52159.7 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.573

Length

456 amino acids

Sequence
(BLAST)

001: MSGMFHGEGL EGSFNYEERK ERRSEVENSE DERRRTRIGS LKKKALNAST RFTHSLRKRG SRVDFRVPPL SIEDVRDADE ERAVYSFRQQ LIAKKLLPNK
101: HDDYHTLLRF LKARKFDFER ATQMWAEMLQ WRKEFGTDTI MEDFEFDELE DVVHYYPQGY HGVDKEGRPV YIERLGKAEP NKLMNITTIE RYLKYHVQEF
201: ERALNEKFPA CSIASKRHIG SSTTILDVQG VGLKNFGKTA RDLLLNMQKI DGDYYPETLH QLFIVNAGHG FKLLWNTVKG FLDPKTTSKI HVLGTKYQSR
301: LLEAIDSSQL PDFLGGSCAC YHEGGCLRSN KGPWNDPVIM KGRSCDTSAA ESVSDADDLY SPEPSIAEYA PLSPIHKEVG AADFTPHDDH FVMVDKDVDI
401: GRRGSRFSVR TTEELKDPDL ASSTAALHSL GMTFNILNCS ITGLLIDESF WLWYLS

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.