Factsheet for GSMUA_Achr3P28840_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P22020_001	Banana	cytosol	72.83	42.47
GSMUA_Achr10P...	Banana	cytosol	57.07	37.63
GSMUA_Achr2P09690_001	Banana	cytosol	62.77	36.9
GSMUA_Achr1P12050_001	Banana	cytosol	62.77	36.9
VIT_03s0038g04470.t01	Wine grape	cytosol	62.5	36.8
KRH24438	Soybean	cytosol	60.05	35.14
KRH29416	Soybean	cytosol	59.78	34.98
KRH60804	Soybean	cytosol	58.97	34.78
KXG22454	Sorghum	cytosol	57.88	34.41
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	57.88	34.3
Solyc01g109870.2.1	Tomato	cytosol	57.88	34.08
Zm00001d038880_P001	Maize	cytosol	57.07	33.98
Os05t0545000-01	Rice	cytosol, nucleus, plastid	56.25	33.77
Zm00001d009439_P004	Maize	cytosol	56.25	33.5
PGSC0003DMT400001942	Potato	cytosol	56.79	33.44
KRH51499	Soybean	cytosol	58.15	33.39
Solyc10g053970.1.1	Tomato	cytosol	56.25	33.23
PGSC0003DMT400043545	Potato	cytosol	57.88	33.13
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	54.62	32.74
Bra010700.1-P	Field mustard	cytosol	54.89	32.69
CDY12125	Canola	cytosol	54.62	32.63
CDX90316	Canola	cytosol	54.62	32.52
AT2G21520.3	Thale cress	cytosol	55.71	32.18
CDY13810	Canola	cytosol	55.16	32.12
Bra031196.1-P	Field mustard	cytosol	55.16	32.12
CDX82040	Canola	cytosol	51.09	31.18
CDY15888	Canola	cytosol	23.91	31.1
Bra030295.1-P	Field mustard	cytosol	23.91	31.1
CDX99587	Canola	cytosol, mitochondrion	23.64	30.74
GSMUA_Achr1P25320_001	Banana	cytosol	54.62	30.73
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	58.15	30.06
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	57.61	29.69
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	57.61	29.08
KXG33199	Sorghum	cytosol	46.74	28.43
Zm00001d011663_P003	Maize	cytosol	47.01	28.18
TraesCS3D01G255900.4	Wheat	cytosol	45.92	27.48
Zm00001d043733_P002	Maize	mitochondrion	40.49	27.14
TraesCS3A01G255000.6	Wheat	cytosol	47.01	27.12
TraesCS3B01G287000.6	Wheat	cytosol	46.74	26.96
Os01t0701900-01	Rice	nucleus	48.91	26.83
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	47.83	26.31
GSMUA_Achr6P03210_001	Banana	cytosol	42.39	26.26
GSMUA_Achr5P23630_001	Banana	cytosol	42.93	26.25
GSMUA_Achr2P14280_001	Banana	cytosol, nucleus, plastid	43.48	24.24
GSMUA_Achr7P06190_001	Banana	cytosol	33.15	21.14
GSMUA_Achr3P04130_001	Banana	nucleus	35.33	20.87
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	34.51	20.82
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	35.05	19.55
GSMUA_Achr4P09770_001	Banana	cytosol	23.91	19.3
GSMUA_Achr5P04200_001	Banana	plastid	32.61	19.2
GSMUA_AchrUn_...	Banana	mitochondrion	15.49	15.36
GSMUA_Achr9P01730_001	Banana	plastid	13.32	14.2
GSMUA_Achr3P28070_001	Banana	cytosol	11.68	12.8
GSMUA_Achr4P13090_001	Banana	cytosol	11.41	12.5
GSMUA_Achr3P12050_001	Banana	cytosol	10.87	11.98
GSMUA_Achr7P06060_001	Banana	cytosol	10.6	11.71
GSMUA_Achr1P19200_001	Banana	cytosol	10.33	11.28
GSMUA_Achr1P09480_001	Banana	cytosol	9.51	10.45
GSMUA_Achr6P06610_001	Banana	mitochondrion	11.96	10.11
GSMUA_Achr3P28830_001	Banana	nucleus	0.54	0.75

Protein Annotations

EnsemblPlants:GSMUA_Achr3P28840_001	EnsemblPlants:GSMUA_Achr3T28840_001	EnsemblPlantsGene:GSMUA_Achr3G28840_001	Gene3D:3.40.525.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:IPR001251	InterPro:IPR036865	ncoils:Coil
PANTHER:PTHR23324	PANTHER:PTHR23324:SF145	PFAM:PF00650	PFscan:PS50191	SEG:seg	SUPFAM:SSF52087
TMHMM:TMhelix	UniParc:UPI000294852E	UniProt:M0SIQ0	MapMan:35.1	:	:

Description

phosphatidylinositol transfer, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G28840_001]

Coordinates

chr3:+:28243461..28249102

Molecular Weight (calculated)

41609.1 Da

IEP (calculated)

7.017

GRAVY (calculated)

-0.346

Length

368 amino acids

Sequence
(BLAST)

001: MQTLCRMFVV NASSGFKLLW NTVKSFLDPK TTSKIHVLGT KYQNKLLEVI DSSELPEFLG GSCTCAEHGG CLRSDRGPWR DPNILKMVLN GEAQCARQIV
101: AVSNCEGKII AYAKPRYPTI KGSDTSTESS SEAEDIVYSK KTINYIHNPQ LDPVHEEAKI VGKACISDAS SEYEDCVPMV DKVVDVGWKN QISSSVCSSS
201: RGRFWLFDMS EPSEGIRAQI VTWLMAFIMA LYAMFCSVTR RVTRRLPDNM LKSDHCYPEF DPNPMPKEEF RPPSPSPTFK DVDILSSFLK RLGELEEKVD
301: KLQAKPSAMP HEKEELLDAA VRRVDALEAE LIATKRALYD ALMRQEELLA YIDQQKEAKF RKKKCFCF

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.