Factsheet for TraesCS3D01G255900.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G287000.6	Wheat	cytosol	96.75	93.26
TraesCS3A01G255000.6	Wheat	cytosol	95.28	91.85
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	90.73	83.41
GSMUA_Achr3P28830_001	Banana	nucleus	30.08	69.81
KXG33199	Sorghum	cytosol	67.64	68.76
Zm00001d011663_P003	Maize	cytosol	65.37	65.47
Zm00001d043733_P002	Maize	mitochondrion	57.07	63.93
Os01t0701900-01	Rice	nucleus	67.32	61.7
CDY15888	Canola	cytosol	28.13	61.13
Bra030295.1-P	Field mustard	cytosol	28.13	61.13
CDX99587	Canola	cytosol, mitochondrion	27.64	60.07
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	67.64	58.26
GSMUA_Achr9P22020_001	Banana	cytosol	57.89	56.42
CDX82040	Canola	cytosol	51.22	52.24
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	52.03	52.12
VIT_03s0038g04470.t01	Wine grape	cytosol	52.85	52.0
Solyc01g109870.2.1	Tomato	cytosol	52.85	52.0
PGSC0003DMT400001942	Potato	cytosol	52.36	51.52
KRH60804	Soybean	cytosol	52.2	51.44
KRH29416	Soybean	cytosol	52.52	51.35
KRH24438	Soybean	cytosol	52.36	51.19
Solyc10g053970.1.1	Tomato	cytosol	51.71	51.04
CDY13810	Canola	cytosol	51.87	50.47
CDY12125	Canola	cytosol	50.24	50.16
Bra010700.1-P	Field mustard	cytosol	50.08	49.84
Bra031196.1-P	Field mustard	cytosol	51.06	49.68
CDX90316	Canola	cytosol	49.92	49.68
AT2G21520.3	Thale cress	cytosol	51.38	49.61
PGSC0003DMT400043545	Potato	cytosol	51.54	49.3
KRH51499	Soybean	cytosol	51.06	48.99
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	51.38	48.54
GSMUA_Achr3P28840_001	Banana	mitochondrion	27.48	45.92
GSMUA_Achr1P25320_001	Banana	cytosol	48.62	45.72
TraesCS2D01G335700.2	Wheat	nucleus	41.95	43.65
TraesCS2D01G506400.1	Wheat	nucleus	42.76	41.55
TraesCS7D01G238000.2	Wheat	cytosol	40.16	40.83
TraesCS6D01G085200.1	Wheat	plastid	40.65	40.65
TraesCS6D01G265200.1	Wheat	cytosol	40.49	40.23
TraesCS2D01G500100.2	Wheat	mitochondrion	25.04	39.39
TraesCS6D01G149100.1	Wheat	cytosol	13.33	25.08
TraesCS5D01G174400.1	Wheat	cytosol	13.33	24.48
TraesCS7D01G375200.1	Wheat	cytosol	12.85	24.31

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF69	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G255900	EnsemblPlants:TraesCS3D01G255900.4	TIGR:cd00170	SEG:seg

Description

No Description!

Coordinates

chr3D:+:357635630..357642075

Molecular Weight (calculated)

69609.1 Da

IEP (calculated)

7.854

GRAVY (calculated)

-0.502

Length

615 amino acids

Sequence
(BLAST)

001: MSGPVDRSGR PGFEGFTHDD ENEESKSDED NSEGDNKAKK GSFKKRAISA GNKFRRSLRR KSKKKSGNLA SIEDIRDVQE LETVERFRRC LLDGGLLPER
101: HDDYHTMLRF LKARKFDIEK AKHMWSEMLR WRNEYGVDSI EEFDYTELNE VKKYYPQFYH GVDKEGRPVY VELVGKVDAN KLVKVTTLDR YIKYHVKEFE
201: RSFQMRFPAC SIAAKRHIDS STTILDVQGV GLKNFSKDAR ELIMRLQKID NDNYPETLCR LYIINAGQGF KMLWGTIKSF LDPQTASKIH VLGSKYQNKL
301: LEIIDESELP DFLGGKCRCE ESGGCSKSDK GPWKDPNIIE RVLNGEANYG QQILAISSTD GKTVSYTKLH SSAKKTSDAS AESTSDVEDI TSPAAPLDAT
401: VNPDLTLHEP KSSGHASTSG TATVLEESVP TVVDKLVDDV CNSPKATSMA STSGSFSLRN IRMALGVLRT QIVTCLTVLI MSLFMVIRSA PSRVSERFSR
501: QSIGCDHNCG EFPQNLEFKV PYVLRRLREL EEKVVVLETK PSQMPVEKEE LLNTAVCRVD ALEAELISTK KVLYETLIRQ DELLAYIEKQ DKNKFRVCFP
601: LLFVRPLLSW RVLGA

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.