Factsheet for TraesCS2D01G500100.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G499900.1	Wheat	mitochondrion	96.68	96.18
TraesCS2B01G527900.2	Wheat	mitochondrion	96.42	95.69
HORVU2Hr1G111160.14	Barley	mitochondrion	96.16	95.43
Zm00001d019582_P001	Maize	cytosol	63.68	77.81
Os07t0456500-01	Rice	cytosol	45.52	75.11
OQU88968	Sorghum	cytosol	78.26	74.45
GSMUA_AchrUn_...	Banana	mitochondrion	50.38	53.1
AT5G47510.4	Thale cress	cytosol	44.25	45.89
CDX77773	Canola	cytosol	46.55	44.72
CDY17730	Canola	cytosol	45.78	44.53
Bra024938.1-P	Field mustard	cytosol	45.78	44.53
VIT_02s0154g00510.t01	Wine grape	cytosol	40.66	41.3
KRH28067	Soybean	cytosol	48.34	41.09
KRH77370	Soybean	cytosol	47.83	40.39
Solyc08g078680.2.1	Tomato	cytosol	47.57	38.75
TraesCS7D01G238000.2	Wheat	cytosol	41.43	26.78
TraesCS2D01G335700.2	Wheat	nucleus	37.85	25.04
TraesCS3D01G255900.4	Wheat	cytosol	39.39	25.04
TraesCS2D01G506400.1	Wheat	nucleus	40.15	24.8
TraesCS6D01G085200.1	Wheat	plastid	38.87	24.72
TraesCS6D01G265200.1	Wheat	cytosol	38.62	24.39
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	39.39	23.66
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	38.62	21.15
TraesCS5D01G174400.1	Wheat	cytosol	17.65	20.6
TraesCS6D01G149100.1	Wheat	cytosol	16.88	20.18
TraesCS7D01G375200.1	Wheat	cytosol	15.6	18.77

Protein Annotations

EnsemblPlants:TraesCS2D01G500100.2	EnsemblPlantsGene:TraesCS2D01G500100	Gene3D:1.10.8.20	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	ncoils:Coil	PANTHER:PTHR23324
PANTHER:PTHR23324:SF63	PFAM:PF00650	PFscan:PS50191	SEG:seg	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2D:-:594581106..594594557

Molecular Weight (calculated)

44497.9 Da

IEP (calculated)

8.469

GRAVY (calculated)

-0.354

Length

391 amino acids

Sequence
(BLAST)

001: MSFRSIEQLL RRNSKIKISQ SIIANGIHDP KEEQSVQALR ESLLASNQLP EKFDDHHVLL RFLRMRGFNI IKAKEMFLNM LKWREDCAVD TIAKDFKFEE
101: FDALKRCYPH GFHGVDRFGR PLYIERIGSV DLSKLMQVTS IDRYIKYHIS EQEKTLSLRY PACSLAAKKH ISSTTAILDV KGLGMNNFSK AAREMFIEIQ
201: KIDSNYYPET LHQLYIINAG SGFRALWRVL KAFMEARTLK KIQVLGTNYL STVLEAVEPS NLPEFLGGTC SCSATGGCLL QDKGPWTDAG IIRASKEPSA
301: RHVDSTCGRK RTLGMLLLED NQVANQMSEN IHQKQANEQI SGKIQELEDC AAQTKETLET LICKQKELGI HIEQLRELLR DDVLAEKKTS I

Best Arabidopsis Sequence Match ( AT5G47510.4 )
(BLAST)

001: MMQETDRDIH ISDGTMNKEE QSPNNEEMVE AFRNLLLLHG HLPDKHGDHN TLRRFLKMRD FDLEKSKEAF LNYMKWRVDY KVDLISQKFK FEEYGEVKKH
101: YPHGFHKVDK TGRPIYIERL GMTDLNAFLK ATTIERYVNY HIKEQEKTMS LRYPACSIAS DKHVSSTTTI LDVSGVGMSN FSKPARSLFM EIQKIDSNYY
201: PETLHRLFVV NASSGFRMLW LALKTFLDAR TLAKVQVLGP NYLGELLEAI EPSNLPTFLG GNCTCSDHGG CLFSDEGPWN DPGIKEKIEE PSTIEDAHSE
301: TMDKVSENAP ANQKESLGEV MITMEKYAAL KTAVKDSQKR IEMLEISLHE TKKVLNGLAE IIEAIQPNQP ITKCKPV

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:TAIR;Acc:AT5G47510]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.