Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1B01G384500.1 | Wheat | cytosol, nucleus, plastid | 85.01 | 97.75 |
TraesCS1A01G366700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 95.1 | 95.37 |
HORVU1Hr1G078880.9 | Barley | cytosol, nucleus | 89.5 | 87.65 |
Os05t0545000-01 | Rice | cytosol, nucleus, plastid | 71.85 | 83.69 |
KXG22454 | Sorghum | cytosol | 69.75 | 80.45 |
Zm00001d009439_P004 | Maize | cytosol | 68.63 | 79.29 |
Zm00001d038880_P001 | Maize | cytosol | 67.93 | 78.48 |
GSMUA_Achr3P28830_001 | Banana | nucleus | 26.33 | 70.94 |
TraesCS3D01G255900.4 | Wheat | cytosol | 58.26 | 67.64 |
CDY15888 | Canola | cytosol | 25.49 | 64.31 |
Bra030295.1-P | Field mustard | cytosol | 25.49 | 64.31 |
CDX99587 | Canola | cytosol, mitochondrion | 25.07 | 63.25 |
GSMUA_Achr9P22020_001 | Banana | cytosol | 55.74 | 63.07 |
KRH29416 | Soybean | cytosol | 52.1 | 59.14 |
KRH24438 | Soybean | cytosol | 51.82 | 58.82 |
KRH60804 | Soybean | cytosol | 51.12 | 58.49 |
VIT_03s0038g04470.t01 | Wine grape | cytosol | 51.12 | 58.4 |
GSMUA_Achr3P28840_001 | Banana | mitochondrion | 29.69 | 57.61 |
Solyc01g109870.2.1 | Tomato | cytosol | 50.42 | 57.6 |
PGSC0003DMT400001942 | Potato | cytosol | 50.28 | 57.44 |
CDY13810 | Canola | cytosol | 50.14 | 56.65 |
CDX82040 | Canola | cytosol | 47.76 | 56.55 |
AT2G21520.3 | Thale cress | cytosol | 50.28 | 56.36 |
AT4G39170.1 | Thale cress | cytosol, nucleus, plastid | 48.32 | 56.19 |
CDY12125 | Canola | cytosol | 48.46 | 56.17 |
Bra010700.1-P | Field mustard | cytosol | 48.6 | 56.15 |
CDX90316 | Canola | cytosol | 48.46 | 55.99 |
KRH51499 | Soybean | cytosol | 49.86 | 55.54 |
Bra031196.1-P | Field mustard | cytosol | 49.02 | 55.38 |
Solyc10g053970.1.1 | Tomato | cytosol | 47.9 | 54.9 |
PGSC0003DMT400043545 | Potato | cytosol | 48.46 | 53.81 |
TraesCS6D01G085300.6 | Wheat | cytosol, nucleus, plastid | 47.62 | 52.23 |
GSMUA_Achr1P25320_001 | Banana | cytosol | 45.1 | 49.24 |
TraesCS2D01G335700.2 | Wheat | nucleus | 37.68 | 45.52 |
TraesCS2D01G506400.1 | Wheat | nucleus | 38.94 | 43.92 |
TraesCS6D01G265200.1 | Wheat | cytosol | 37.4 | 43.13 |
TraesCS6D01G085200.1 | Wheat | plastid | 36.83 | 42.76 |
TraesCS7D01G238000.2 | Wheat | cytosol | 36.13 | 42.64 |
TraesCS2D01G500100.2 | Wheat | mitochondrion | 21.15 | 38.62 |
TraesCS6D01G149100.1 | Wheat | cytosol | 11.62 | 25.38 |
TraesCS5D01G174400.1 | Wheat | cytosol | 11.76 | 25.07 |
TraesCS7D01G375200.1 | Wheat | cytosol | 11.34 | 24.92 |
Protein Annotations
Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil | InterPro:IPR001251 | InterPro:IPR036865 | PFAM:PF00650 | PFAM:PF03765 |
PRINTS:PR00180 | PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF72 | SMART:SM00516 | SMART:SM01100 |
SUPFAM:SSF46938 | SUPFAM:SSF52087 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1D01G372200 | EnsemblPlants:TraesCS1D01G372200.1 | TIGR:cd00170 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:450218058..450224037
Molecular Weight (calculated)
80514.2 Da
IEP (calculated)
8.651
GRAVY (calculated)
-0.585
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVYPRRDG NPRAPALWLL LPAGVARPIK TVGEGEASPP PPPPAPKSAP IFRNREVKIS AGNEIPRLFV SYAPGTDSGP GASLGRSIPE PEGMSGPLDR
101: LARPSFEGFT HNDGKKESRS DADNSEGEKK TKIASFKKKA INAGNKFRHS LRRRSKKKND NQISIEDIRH VQDLQAVEAF RQCLLDEDLL PQQHDDYHMM
201: LRFLKARKFD VEKAKLMWSD MLTWRKEFGT DNIEEFDYAE LNEVMKYYPQ FYHGVDKDGR PVYVELIGKV DANKVLQVTT IDRYVKYHVK EFEKCFQMRF
301: PACSIAAKRH LDSCTTILDV QGVGLKNFSK CARELITRLQ KIDSDNYPET LCRMYIINAG QGFKMLWGTI KSFLDPKTAS KIHVLGTKYQ NKLLEIIDES
401: ELPEFFGGKC KCEEHGGCQR SDKGPWKDPT TIKRVLNGEA NYDRQIVTIS GTDGKIISYA RPQRPNQGKG SDASAESGSE VEDVTSPIAP KTLITNPSLT
501: PVHEESKFAA HASTSAARPT IEESIPVVDK VVDDGWSSPR ASPVSSSSGS LSLRNLPTTF EGIRTLVVAW LTVFIVTLFA MLRSIPSRMA KRLSNQSNDH
601: DHYYVDCPQE QEYKEEFRPP SPAPAYTEKE ILSTLVRRLG ELEEKVQALE KKPSEMPFEK EELLNASARR VDALEADLIS TKKALYEALM RQDELLAFID
701: KQDMLKFRKK KLCF
101: LARPSFEGFT HNDGKKESRS DADNSEGEKK TKIASFKKKA INAGNKFRHS LRRRSKKKND NQISIEDIRH VQDLQAVEAF RQCLLDEDLL PQQHDDYHMM
201: LRFLKARKFD VEKAKLMWSD MLTWRKEFGT DNIEEFDYAE LNEVMKYYPQ FYHGVDKDGR PVYVELIGKV DANKVLQVTT IDRYVKYHVK EFEKCFQMRF
301: PACSIAAKRH LDSCTTILDV QGVGLKNFSK CARELITRLQ KIDSDNYPET LCRMYIINAG QGFKMLWGTI KSFLDPKTAS KIHVLGTKYQ NKLLEIIDES
401: ELPEFFGGKC KCEEHGGCQR SDKGPWKDPT TIKRVLNGEA NYDRQIVTIS GTDGKIISYA RPQRPNQGKG SDASAESGSE VEDVTSPIAP KTLITNPSLT
501: PVHEESKFAA HASTSAARPT IEESIPVVDK VVDDGWSSPR ASPVSSSSGS LSLRNLPTTF EGIRTLVVAW LTVFIVTLFA MLRSIPSRMA KRLSNQSNDH
601: DHYYVDCPQE QEYKEEFRPP SPAPAYTEKE ILSTLVRRLG ELEEKVQALE KKPSEMPFEK EELLNASARR VDALEADLIS TKKALYEALM RQDELLAFID
701: KQDMLKFRKK KLCF
001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.