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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:
  • mitochondrion 3
  • nucleus 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G384500.1 Wheat cytosol, nucleus, plastid 85.01 97.75
TraesCS1A01G366700.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 95.1 95.37
HORVU1Hr1G078880.9 Barley cytosol, nucleus 89.5 87.65
Os05t0545000-01 Rice cytosol, nucleus, plastid 71.85 83.69
KXG22454 Sorghum cytosol 69.75 80.45
Zm00001d009439_P004 Maize cytosol 68.63 79.29
Zm00001d038880_P001 Maize cytosol 67.93 78.48
GSMUA_Achr3P28830_001 Banana nucleus 26.33 70.94
TraesCS3D01G255900.4 Wheat cytosol 58.26 67.64
CDY15888 Canola cytosol 25.49 64.31
Bra030295.1-P Field mustard cytosol 25.49 64.31
CDX99587 Canola cytosol, mitochondrion 25.07 63.25
GSMUA_Achr9P22020_001 Banana cytosol 55.74 63.07
KRH29416 Soybean cytosol 52.1 59.14
KRH24438 Soybean cytosol 51.82 58.82
KRH60804 Soybean cytosol 51.12 58.49
VIT_03s0038g04470.t01 Wine grape cytosol 51.12 58.4
GSMUA_Achr3P28840_001 Banana mitochondrion 29.69 57.61
Solyc01g109870.2.1 Tomato cytosol 50.42 57.6
PGSC0003DMT400001942 Potato cytosol 50.28 57.44
CDY13810 Canola cytosol 50.14 56.65
CDX82040 Canola cytosol 47.76 56.55
AT2G21520.3 Thale cress cytosol 50.28 56.36
AT4G39170.1 Thale cress cytosol, nucleus, plastid 48.32 56.19
CDY12125 Canola cytosol 48.46 56.17
Bra010700.1-P Field mustard cytosol 48.6 56.15
CDX90316 Canola cytosol 48.46 55.99
KRH51499 Soybean cytosol 49.86 55.54
Bra031196.1-P Field mustard cytosol 49.02 55.38
Solyc10g053970.1.1 Tomato cytosol 47.9 54.9
PGSC0003DMT400043545 Potato cytosol 48.46 53.81
TraesCS6D01G085300.6 Wheat cytosol, nucleus, plastid 47.62 52.23
GSMUA_Achr1P25320_001 Banana cytosol 45.1 49.24
TraesCS2D01G335700.2 Wheat nucleus 37.68 45.52
TraesCS2D01G506400.1 Wheat nucleus 38.94 43.92
TraesCS6D01G265200.1 Wheat cytosol 37.4 43.13
TraesCS6D01G085200.1 Wheat plastid 36.83 42.76
TraesCS7D01G238000.2 Wheat cytosol 36.13 42.64
TraesCS2D01G500100.2 Wheat mitochondrion 21.15 38.62
TraesCS6D01G149100.1 Wheat cytosol 11.62 25.38
TraesCS5D01G174400.1 Wheat cytosol 11.76 25.07
TraesCS7D01G375200.1 Wheat cytosol 11.34 24.92
Protein Annotations
Gene3D:1.10.8.20Gene3D:3.40.525.10MapMan:35.1InterPro:CRAL-TRIO_domInterPro:CRAL-TRIO_dom_sfInterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sfncoils:CoilInterPro:IPR001251InterPro:IPR036865PFAM:PF00650PFAM:PF03765
PRINTS:PR00180PFscan:PS50191PANTHER:PTHR23324PANTHER:PTHR23324:SF72SMART:SM00516SMART:SM01100
SUPFAM:SSF46938SUPFAM:SSF52087TMHMM:TMhelixEnsemblPlantsGene:TraesCS1D01G372200EnsemblPlants:TraesCS1D01G372200.1TIGR:cd00170
SEG:seg:::::
Description
No Description!
Coordinates
chr1D:+:450218058..450224037
Molecular Weight (calculated)
80514.2 Da
IEP (calculated)
8.651
GRAVY (calculated)
-0.585
Length
714 amino acids
Sequence
(BLAST)
001: MGRVYPRRDG NPRAPALWLL LPAGVARPIK TVGEGEASPP PPPPAPKSAP IFRNREVKIS AGNEIPRLFV SYAPGTDSGP GASLGRSIPE PEGMSGPLDR
101: LARPSFEGFT HNDGKKESRS DADNSEGEKK TKIASFKKKA INAGNKFRHS LRRRSKKKND NQISIEDIRH VQDLQAVEAF RQCLLDEDLL PQQHDDYHMM
201: LRFLKARKFD VEKAKLMWSD MLTWRKEFGT DNIEEFDYAE LNEVMKYYPQ FYHGVDKDGR PVYVELIGKV DANKVLQVTT IDRYVKYHVK EFEKCFQMRF
301: PACSIAAKRH LDSCTTILDV QGVGLKNFSK CARELITRLQ KIDSDNYPET LCRMYIINAG QGFKMLWGTI KSFLDPKTAS KIHVLGTKYQ NKLLEIIDES
401: ELPEFFGGKC KCEEHGGCQR SDKGPWKDPT TIKRVLNGEA NYDRQIVTIS GTDGKIISYA RPQRPNQGKG SDASAESGSE VEDVTSPIAP KTLITNPSLT
501: PVHEESKFAA HASTSAARPT IEESIPVVDK VVDDGWSSPR ASPVSSSSGS LSLRNLPTTF EGIRTLVVAW LTVFIVTLFA MLRSIPSRMA KRLSNQSNDH
601: DHYYVDCPQE QEYKEEFRPP SPAPAYTEKE ILSTLVRRLG ELEEKVQALE KKPSEMPFEK EELLNASARR VDALEADLIS TKKALYEALM RQDELLAFID
701: KQDMLKFRKK KLCF
Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)
001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.