Factsheet for Bra010700.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90316	Canola	cytosol	99.51	99.51
CDY12125	Canola	cytosol	98.22	98.54
AT4G39170.1	Thale cress	cytosol, nucleus, plastid	89.64	90.23
Bra030295.1-P	Field mustard	cytosol	38.03	83.04
Bra031196.1-P	Field mustard	cytosol	81.07	79.27
GSMUA_Achr3P28830_001	Banana	nucleus	33.01	76.98
VIT_03s0038g04470.t01	Wine grape	cytosol	73.62	72.8
KRH60804	Soybean	cytosol	73.3	72.6
KRH29416	Soybean	cytosol	73.3	72.02
KRH24438	Soybean	cytosol	72.98	71.7
Solyc01g109870.2.1	Tomato	cytosol	70.87	70.08
PGSC0003DMT400001942	Potato	cytosol	70.71	69.92
Solyc10g053970.1.1	Tomato	cytosol	70.39	69.82
KRH51499	Soybean	cytosol	71.04	68.49
PGSC0003DMT400043545	Potato	cytosol	70.39	67.65
GSMUA_Achr2P09690_001	Banana	cytosol	68.28	67.41
GSMUA_Achr1P12050_001	Banana	cytosol	67.8	66.93
GSMUA_Achr9P22020_001	Banana	cytosol	66.67	65.29
KXG29407	Sorghum	cytosol, nucleus, plastid	64.4	63.58
TraesCS6A01G097100.2	Wheat	cytosol, nucleus, plastid	64.24	63.02
TraesCS6B01G125600.1	Wheat	cytosol, nucleus, plastid	63.75	62.54
GSMUA_Achr10P...	Banana	cytosol	56.31	62.37
Zm00001d015174_P005	Maize	cytosol	65.05	61.47
Os02t0133100-01	Rice	cytosol	41.59	60.76
Zm00001d053994_P008	Maize	cytosol, mitochondrion	64.72	60.06
Os05t0545000-01	Rice	cytosol, nucleus, plastid	57.93	58.4
TraesCS6D01G085300.6	Wheat	cytosol, nucleus, plastid	61.0	57.91
Bra025754.1-P	Field mustard	nucleus	56.96	57.7
Zm00001d038880_P001	Maize	cytosol	57.61	57.61
KXG22454	Sorghum	cytosol	57.28	57.19
Zm00001d009439_P004	Maize	cytosol	57.12	57.12
TraesCS1B01G384500.1	Wheat	cytosol, nucleus, plastid	56.47	56.2
GSMUA_Achr3P28840_001	Banana	mitochondrion	32.69	54.89
Bra034638.1-P	Field mustard	cytosol	48.22	54.78
Bra003757.1-P	Field mustard	cytosol	55.99	54.75
Bra011544.1-P	Field mustard	cytosol, plastid	42.72	53.33
HORVU6Hr1G017570.5	Barley	cytosol, nucleus, plastid	64.24	53.29
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	42.07	53.28
KXG33199	Sorghum	cytosol	51.78	52.89
Bra010699.1-P	Field mustard	cytosol	45.31	52.14
Bra017663.1-P	Field mustard	cytosol, plastid	38.19	51.75
GSMUA_Achr1P25320_001	Banana	cytosol	54.53	51.53
Zm00001d011663_P003	Maize	cytosol	50.49	50.81
TraesCS3D01G255900.4	Wheat	cytosol	49.84	50.08
TraesCS3B01G287000.6	Wheat	cytosol	50.81	49.22
TraesCS3A01G255000.6	Wheat	cytosol	50.32	48.75
TraesCS1D01G372200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	56.15	48.6
TraesCS1A01G366700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	55.83	48.46
Zm00001d043733_P002	Maize	mitochondrion	42.88	48.27
Os01t0701900-01	Rice	nucleus	51.62	47.54
HORVU1Hr1G078880.9	Barley	cytosol, nucleus	55.66	47.19
HORVU3Hr1G065830.17	Barley	cytosol, mitochondrion, plastid	50.49	46.64
Bra030841.1-P	Field mustard	nucleus	38.84	40.07
Bra024938.1-P	Field mustard	cytosol	25.08	38.56
Bra002841.1-P	Field mustard	cytosol	31.72	37.48
Bra015089.1-P	Field mustard	cytosol	29.94	34.58
Bra038021.1-P	Field mustard	cytosol	14.4	27.22
Bra030831.1-P	Field mustard	cytosol	14.08	26.77
Bra022153.1-P	Field mustard	cytosol	13.92	25.98
Bra028944.1-P	Field mustard	plastid	28.16	25.0
Bra017468.1-P	Field mustard	cytosol	13.27	24.62
Bra024920.1-P	Field mustard	cytosol	13.11	24.25
Bra038012.1-P	Field mustard	cytosol	40.29	23.54
Bra013077.1-P	Field mustard	cytosol, plastid	43.85	18.57
Bra002840.1-P	Field mustard	cytosol	0.16	1.3

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra010700	EnsemblPlants:Bra010700.1	EnsemblPlants:Bra010700.1-P
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001251	InterPro:IPR036865
UniProt:M4D2K0	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF145	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TMHMM:TMhelix
UniParc:UPI0002546969	SEG:seg	:	:	:	:

Description

AT4G39170 (E=0.0) | SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative

Coordinates

chrA08:-:16042855..16045377

Molecular Weight (calculated)

70367.9 Da

IEP (calculated)

8.989

GRAVY (calculated)

-0.477

Length

618 amino acids

Sequence
(BLAST)

001: MSGPVDRFAI PCFEGLLSSE EKKERKSDFE ISEDERRTRI GSLKKKAINA STKFKHSLKK KKRRKNEGRV SSVSIEDVRD VEELQAVDEF RQALVMDELL
101: PSKHDDYHMM LRFLKARKFD VEKAKQMWGD MIQWRKEFGT DTIIQDFEFE EIDDVLKYYP QCYHSVDKEG RPVYIERLGK VDPNKLMQVT TIDRYLRYHV
201: KEFERSFMIK FPACTIAAKK HIDSSTTILD VQGVGLKNFS KYARELVTRL QKIDGDNYPE TLHQMFIINA GTGFRVIWST LKSFLDPKTT SKIHMLGNKY
301: QSKLLEVIDS SELPEFLGGT CTCADQGGCM LSDKGPWKNP DILKMVLHGG AHRAKQVVKV LNSEGKVIAY AKPSYPWIKG SDTSTAESGS EAEDVVVSPK
401: AIKNYSHLRL TPVREEAKIG SGETSFAGSL AGYDEYVPMV DKAVDATWKV KPTTTINRVQ SKGALVTPNV PKEHESISAR VLVFFMAIVM AILAFFRTLS
501: NRVVTKQLPP PTRQPQIEGN TAAKEEEAEL LNSVLKKLTE LEEKIGALQS KPNEMPYEKE ELLNAAVCRV DALEAELIAT KKALYEALMR QEELLAYIDR
601: QEFAQSQKKK KRKHMFCF

Best Arabidopsis Sequence Match ( AT4G39170.1 )
(BLAST)

001: MSGPVDRFAI PCFEGILSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KRRKSDVRVS SVSIEDVRDV EELQAVDEFR QALVMEELLP
101: HKHDDYHMML RFLKARKFDI EKAKHMWADM IQWRKEFGTD TIIQDFQFEE IDEVLKYYPH GYHSVDKEGR PVYIERLGKV DPNKLMQVTT LDRYIRYHVK
201: EFERSFMLKF PACTIAAKKY IDSSTTILDV QGVGLKNFTK SARELITRLQ KIDGDNYPET LHQMFIINAG PGFRLLWSTV KSFLDPKTTS KIHVLGCKYQ
301: SKLLEIIDSS ELPEFLGGAC TCADQGGCML SDKGPWKNPE IVKMVLHGGA HRAKQVVKVL NSDGKVIAYA KPSYPWIKGS DTSTAESGSE AEDIVVSPKA
401: VKSYSHLRLT PVREEAKVGS GETSFAGSFA GYDEYVPMVD KAVDATWKVK PTAINRAPSK GAHMPPNVPK DHESFSARVL VTFMAFVMAI LTFFRTVSNR
501: VVTKQLPPPP SQPQIEGSAA AEEADLLNSV LKKLTELEEK IGALQSKPSE MPYEKEELLN AAVCRVDALE AELIATKKAL YEALMRQEEL LAYIDRQEAA
601: QHQKKNKRKQ MFCF

Arabidopsis Description

SFH6Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 [Source:UniProtKB/Swiss-Prot;Acc:F4JVA6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.