Factsheet for Bra030841.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42378	Canola	nucleus	100.0	93.16
AT1G55690.4	Thale cress	nucleus	80.63	77.28
Zm00001d039981_P001	Maize	cytosol	14.86	72.36
Zm00001d031251_P001	Maize	cytosol, mitochondrion	14.86	68.99
HORVU1Hr1G088100.1	Barley	cytosol	17.7	65.84
HORVU7Hr1G037200.1	Barley	nucleus	22.2	62.15
Zm00001d012531_P001	Maize	mitochondrion	13.52	61.83
VIT_19s0015g01160.t01	Wine grape	cytosol	62.6	60.39
HORVU3Hr1G112740.3	Barley	nucleus	22.54	60.27
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	22.2	59.38
KRH62508	Soybean	cytosol	59.1	57.1
KRH56402	Soybean	cytosol	58.43	56.45
KRH45371	Soybean	cytosol	40.73	55.45
Solyc07g066090.2.1	Tomato	nucleus	57.26	55.32
Zm00001d043774_P001	Maize	cytosol	7.85	55.29
PGSC0003DMT400057292	Potato	nucleus	56.26	54.53
KRH07662	Soybean	cytosol	55.26	53.47
PGSC0003DMT400022405	Potato	cytosol, nucleus	51.75	53.26
Solyc10g005740.1.1	Tomato	nucleus	54.76	53.07
Bra002841.1-P	Field mustard	cytosol	45.08	51.63
GSMUA_Achr4P09770_001	Banana	cytosol	37.56	49.34
GSMUA_Achr7P06190_001	Banana	cytosol	45.41	47.14
GSMUA_Achr3P04130_001	Banana	nucleus	48.25	46.39
Bra030295.1-P	Field mustard	cytosol	21.87	46.29
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	46.08	45.25
Bra038012.1-P	Field mustard	cytosol	79.3	44.9
GSMUA_Achr5P04200_001	Banana	plastid	46.58	44.64
TraesCS7D01G238000.2	Wheat	cytosol	44.91	44.46
Os02t0721800-01	Rice	cytosol	45.24	44.28
Os08t0341700-01	Rice	nucleus	47.08	44.27
OQU80990	Sorghum	cytosol	44.57	43.99
KXG40069	Sorghum	nucleus	46.24	43.97
TraesCS2D01G506400.1	Wheat	nucleus	46.41	43.92
TraesCS2B01G533900.1	Wheat	nucleus	46.08	43.81
Zm00001d017876_P018	Maize	cytosol	45.08	43.76
Zm00001d051674_P037	Maize	cytosol	44.57	43.63
HORVU6Hr1G071770.19	Barley	cytosol	44.91	43.53
TraesCS6D01G265200.1	Wheat	cytosol	44.91	43.46
KXG30865	Sorghum	cytosol	44.74	43.44
TraesCS6B01G313500.1	Wheat	cytosol	44.74	43.3
TraesCS6A01G284800.1	Wheat	cytosol	44.74	43.23
Os08t0497300-01	Rice	cytosol, plastid	43.41	43.05
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	47.41	43.03
Zm00001d005995_P003	Maize	nucleus	42.07	42.07
EER96946	Sorghum	cytosol, nucleus, plastid	41.9	41.9
Os09t0481100-01	Rice	nucleus	42.74	41.9
HORVU7Hr1G048880.11	Barley	mitochondrion	45.08	41.73
Zm00001d045670_P001	Maize	cytosol	12.85	40.96
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	45.41	40.54
TraesCS7B01G135600.2	Wheat	plastid	45.08	40.48
Zm00001d031316_P020	Maize	cytosol	43.07	40.0
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	31.72	38.93
Bra010700.1-P	Field mustard	cytosol	40.07	38.84
Bra010699.1-P	Field mustard	cytosol	34.72	38.73
HORVU1Hr1G091860.1	Barley	cytosol	10.35	38.04
Zm00001d050131_P002	Maize	cytosol	40.57	38.03
Bra017663.1-P	Field mustard	cytosol, plastid	28.71	37.72
Bra031196.1-P	Field mustard	cytosol	39.57	37.5
Bra011544.1-P	Field mustard	cytosol, plastid	30.72	37.17
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	18.36	37.04
Zm00001d052840_P016	Maize	plastid	43.91	36.28
Bra015089.1-P	Field mustard	cytosol	32.39	36.26
Bra034638.1-P	Field mustard	cytosol	32.05	35.29
Bra025754.1-P	Field mustard	nucleus	35.89	35.25
Bra003757.1-P	Field mustard	cytosol	37.06	35.13
Bra028944.1-P	Field mustard	plastid	39.07	33.62
Zm00001d037983_P001	Maize	cytosol	13.02	33.05
Zm00001d045718_P001	Maize	cytosol	13.86	32.81
Bra024938.1-P	Field mustard	cytosol	21.87	32.59
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	9.52	28.79
Zm00001d010393_P001	Maize	plastid	17.36	28.57
Bra038021.1-P	Field mustard	cytosol	13.02	23.85
Bra030831.1-P	Field mustard	cytosol	12.85	23.69
Bra024920.1-P	Field mustard	cytosol	13.02	23.35
Bra017468.1-P	Field mustard	cytosol	12.85	23.12
Bra022153.1-P	Field mustard	cytosol	12.69	22.96
Zm00001d014589_P001	Maize	cytosol	3.34	20.62
Zm00001d005778_P001	Maize	plastid	6.18	13.17
Bra013077.1-P	Field mustard	cytosol, plastid	31.39	12.89
Zm00001d035370_P003	Maize	plastid	8.51	12.5
Zm00001d047488_P001	Maize	nucleus	3.17	11.88
Bra002840.1-P	Field mustard	cytosol	0.17	1.3

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra030841	EnsemblPlants:Bra030841.1	EnsemblPlants:Bra030841.1-P
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865
UniProt:M4EPX0	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF84
SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0002547059	SEG:seg

Description

AT1G55690 (E=9e-158) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Coordinates

chrA08:+:195426..198528

Molecular Weight (calculated)

69462.6 Da

IEP (calculated)

9.016

GRAVY (calculated)

-0.595

Length

599 amino acids

Sequence
(BLAST)

001: MSSLSALHQP ESFPFDRDMS GVEENGALDE IRERRSDFEI SEEDERRRSK IGSLKKKAIN ASTKFTHSLK KRGKKKIDYR FPPVVSIEDV RDEKEESVVL
101: EFRRNLLERD LLPPRHDEYH TLLRFLKARD FNIEKTIQMW EDMLRWRKEY GTDTILEDFE FQELEEVLQY YPQGYHGVDK EGRPVYIERL GKAHPSKLMR
201: ITTIDRYLKY HVQEFERALL EKFPACSIAA KRRIFSTTTI LDVQGLGMKN FSQTAVNLVA AMSKIDNSYY PETLHRMFIV NAGTGFKKML WPAAQKFLDA
301: KTIAKIHVLD PRSLSKLHEV IDSRQISRKL SDPQNSSSSY ISIHPSKAMQ AESSAAESES CSDVPTSLTG RMCSASAHVN PVSEDARASD VNGYYSCDDK
401: FDIPNIATNR KGQERQSHYQ MIELNQATLG LKRETSPPGT PIIRWLHDLR GTMDIIRTEN VAKRILALLL KLAAVFRCIP FQILRRKNTI TPSIPTEDEN
501: RSRLISAPTE TTMKDKIRPC LERIQELEKV YEEMRNKPVE IPVEKERMLM DSLDRIKSVE FDLVKTKRVL HATVVKQMEI TEMLESLRES QLHRRRLFC

Best Arabidopsis Sequence Match ( AT1G55690.5 )
(BLAST)

001: MSGVEEISTL DEFRERRSDF EISEDERRRS KIGNLKKKAI NASTKFTHSL KKRGKRKIDY RVPAVSIEDV RDEKEESVVL EFRRKLLERD LLPPRHDEYH
101: TLLRFLKARD LNIEKTTQLW EEMLRWRKEY GTDTILEDFD FEELEEVLQY YPQGYHGVDK EGRPVYIERL GKAHPSKLMR ITTIDRYLKY HVQEFERALQ
201: EKFPACSIAA KRRICSTTTI LDVQGLGIKN FTPTAANLVA AMSKIDNSYY PETLHRMYIV NAGTGFKKML WPAAQKFLDA KTIAKIHVLE PKSLFKLHEV
301: IDSSQLPEFL GGSCSCFGDG GGCLRSNKGP WNDPEIMKLI YHGESSLFRQ STRKLTDPHY SSSYISIHPS KAIQAETSAA ESISCSDVPS SPTGRLCSAS
401: SHVNSAYEEA RASDVNGYYS CDDKFAIPDK ATNRKGQERQ SQYQMRELNA TTIGLKCETS SPGAPIIRWL HDLRVMIDKI KCENLAKRLL SLMLKLAAVF
501: RYTPLELLRS QTTVSPSSLT EDDSRCSLIS PPPREPTMKD RILPCLERIQ KLEKSYEDIR NKPVAIPVEK ERMLMDSLDR IKSVEFDLDK TKRLLHATVM
601: KQMEITEMLQ NIRDSQLHRR RRLFC

Arabidopsis Description

SFH13Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Source:UniProtKB/Swiss-Prot;Acc:Q501H5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.