Factsheet for Zm00001d043774_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039981_P001	Maize	cytosol	49.41	34.15
Zm00001d031251_P001	Maize	cytosol, mitochondrion	49.41	32.56
Zm00001d012531_P001	Maize	mitochondrion	32.94	21.37
Zm00001d053333_P001	Maize	cytosol	21.18	14.75
Zm00001d015625_P001	Maize	cytosol	21.18	13.85
Zm00001d024390_P001	Maize	cytosol	20.0	13.28
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	28.24	12.12
CDY11954	Canola	cytosol	27.06	11.79
Zm00001d019834_P003	Maize	cytosol, extracellular, plastid	14.12	11.76
Zm00001d051318_P001	Maize	cytosol	23.53	10.53
Zm00001d050144_P001	Maize	cytosol	21.18	10.4
GSMUA_Achr4P09770_001	Banana	cytosol	55.29	10.31
EER96946	Sorghum	cytosol, nucleus, plastid	67.06	9.52
Zm00001d019582_P001	Maize	cytosol	34.12	9.06
KRH45371	Soybean	cytosol	45.88	8.86
Zm00001d005995_P003	Maize	nucleus	62.35	8.85
Os09t0481100-01	Rice	nucleus	63.53	8.84
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	29.41	8.42
Bra030841.1-P	Field mustard	nucleus	55.29	7.85
Zm00001d031316_P020	Maize	cytosol	58.82	7.75
PGSC0003DMT400022405	Potato	cytosol, nucleus	52.94	7.73
Zm00001d050131_P002	Maize	cytosol	57.65	7.67
Zm00001d023995_P002	Maize	extracellular, golgi, plastid	21.18	7.63
Zm00001d017876_P018	Maize	cytosol	55.29	7.62
KRH62508	Soybean	cytosol	55.29	7.58
VIT_19s0015g01160.t01	Wine grape	cytosol	55.29	7.57
GSMUA_Achr5P04200_001	Banana	plastid	55.29	7.52
Zm00001d051674_P037	Maize	cytosol	54.12	7.52
CDY10540	Canola	cytosol, nucleus, plastid	56.47	7.47
Solyc10g005740.1.1	Tomato	nucleus	54.12	7.44
KRH56402	Soybean	cytosol	54.12	7.42
Solyc07g066090.2.1	Tomato	nucleus	54.12	7.42
GSMUA_Achr3P04130_001	Banana	nucleus	54.12	7.38
CDY42378	Canola	nucleus	55.29	7.31
Zm00001d043733_P002	Maize	mitochondrion	47.06	7.29
PGSC0003DMT400057292	Potato	nucleus	52.94	7.28
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	56.47	7.27
Zm00001d016601_P006	Maize	cytosol	51.76	7.27
Zm00001d014589_P001	Maize	cytosol	8.24	7.22
AT1G55690.4	Thale cress	nucleus	52.94	7.2
CDY50018	Canola	vacuole	54.12	7.2
CDY11957	Canola	cytosol	37.65	7.19
KRH07662	Soybean	cytosol	50.59	6.95
Zm00001d052840_P016	Maize	plastid	58.82	6.9
Zm00001d015174_P005	Maize	cytosol	51.76	6.73
Zm00001d009439_P004	Maize	cytosol	48.24	6.63
Zm00001d011663_P003	Maize	cytosol	47.06	6.51
Bra002841.1-P	Field mustard	cytosol	40.0	6.5
Zm00001d015175_P002	Maize	plastid	48.24	6.36
Zm00001d038880_P001	Maize	cytosol	45.88	6.31
Zm00001d053994_P008	Maize	cytosol, mitochondrion	49.41	6.31
Zm00001d015785_P001	Maize	extracellular	23.53	6.12
AT5G56160.1	Thale cress	cytosol	41.18	6.07
CDY51966	Canola	cytosol	41.18	5.88
CDY36780	Canola	plastid	38.82	5.79
CDY17397	Canola	cytosol	40.0	5.71
CDY51073	Canola	mitochondrion, nucleus	30.59	5.09
Bra028944.1-P	Field mustard	plastid	38.82	4.74
Zm00001d046538_P003	Maize	cytosol	21.18	4.58
Bra038012.1-P	Field mustard	cytosol	54.12	4.35
Zm00001d005118_P002	Maize	cytosol	15.29	3.3
Zm00001d010393_P001	Maize	plastid	14.12	3.3
Zm00001d005778_P001	Maize	plastid	10.59	3.2
Zm00001d053648_P005	Maize	cytosol, endoplasmic reticulum, plastid	12.94	3.19
Zm00001d020031_P001	Maize	cytosol	5.88	3.18
Zm00001d035370_P003	Maize	plastid	10.59	2.21
CDY36781	Canola	extracellular	0.0	0.0
Zm00001d047488_P001	Maize	nucleus	0.0	0.0
Zm00001d045718_P001	Maize	cytosol	0.0	0.0
Zm00001d045670_P001	Maize	cytosol	0.0	0.0
Bra002840.1-P	Field mustard	cytosol	0.0	0.0
Zm00001d037983_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d043774_P001	EnsemblPlants:Zm00001d043774_T001	EnsemblPlantsGene:Zm00001d043774	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf
InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF65	ProteinID:ONM38986.1	SEG:seg	SUPFAM:SSF46938
UniParc:UPI000842A598	UniProt:A0A1D6NES6	MapMan:35.2	:	:	:

Description

Phosphatidylinositol/phosphatidylcholine transfer protein SFH13

Coordinates

chr3:-:209682446..209684205

Molecular Weight (calculated)

10330.5 Da

IEP (calculated)

4.526

GRAVY (calculated)

-0.512

Length

85 amino acids

Sequence
(BLAST)

1: MPVSLAKPRC KPPYVVLRVV QVCDLKCMFL EDRKFDSEKA MQMWWEMMRW RKEFGADTVL EDFEFDELDD VLQYYPQGYH GIDRE

Best Arabidopsis Sequence Match ( AT2G18180.3 )
(BLAST)

001: MSIISLNVSS FFRFLKARKF DLEKTNQMWS DMLRWRKEFG ADTVMEDFEF KEIDEVLKYY PQGHHGVDKE GRPVYIERLG QVDSTKLMQV TTMDRYVNYH
101: VMEFERTFNV KFPACSIAAK KHIDQSTTIL DVQGVGLKNF NKAARDLITR LQKVDGDNYP ETLNRMFIIN AGSGFRMLWN TVKSFLDPKT TAKIHVLGNK
201: YQSKLLEIID ASELPEFLGG SCTCADNGGC MRSDKGPWNN PDIMKRVNNG DHICSKRSQA DNAGENIISQ GNNSAVEEAP ETDQSQPSPC QNVVVAHPAW
301: NIPEAHKFSL SKRDVYAIQE ACKATNESGR SPIFTGVMAF VMGVVTMIRV TKNVPRKLTE STIYSSPVYC DENSMNKSSM HGKKMATTTI SGEDFMAVMK
401: RMAELEQKVT NLSAQPATMP PEKEEMLNAA ISRADFLEQE LAATKKALDD SLTRQEDLVA YVERKKKKKK LVRFQINAYL TNFCFGV

Arabidopsis Description

SFH10Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI13]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.