Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053333_P001 | Maize | cytosol | 41.05 | 63.93 |
| Zm00001d024390_P001 | Maize | cytosol | 40.53 | 60.16 |
| Zm00001d015625_P001 | Maize | cytosol | 40.0 | 58.46 |
| Zm00001d050144_P001 | Maize | cytosol | 45.26 | 49.71 |
| Zm00001d019834_P003 | Maize | cytosol, extracellular, plastid | 26.32 | 49.02 |
| Zm00001d023995_P002 | Maize | extracellular, golgi, plastid | 48.42 | 38.98 |
| Zm00001d020031_P001 | Maize | cytosol | 23.68 | 28.66 |
| Zm00001d043774_P001 | Maize | cytosol | 10.53 | 23.53 |
| Zm00001d015785_P001 | Maize | extracellular | 40.0 | 23.24 |
| Zm00001d046538_P003 | Maize | cytosol | 33.68 | 16.29 |
| Zm00001d031251_P001 | Maize | cytosol, mitochondrion | 10.0 | 14.73 |
| Zm00001d039981_P001 | Maize | cytosol | 9.47 | 14.63 |
| Zm00001d012531_P001 | Maize | mitochondrion | 10.0 | 14.5 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 24.21 | 13.33 |
| Zm00001d005118_P002 | Maize | cytosol | 18.95 | 9.14 |
| Zm00001d008240_P001 | Maize | cytosol, extracellular, mitochondrion, nucleus | 8.42 | 8.08 |
| Zm00001d019582_P001 | Maize | cytosol | 9.47 | 5.62 |
| Zm00001d011663_P003 | Maize | cytosol | 17.89 | 5.54 |
| Zm00001d015174_P005 | Maize | cytosol | 18.42 | 5.35 |
| Zm00001d009439_P004 | Maize | cytosol | 17.37 | 5.34 |
| Zm00001d053994_P008 | Maize | cytosol, mitochondrion | 18.42 | 5.26 |
| Zm00001d017876_P018 | Maize | cytosol | 16.84 | 5.19 |
| Zm00001d038880_P001 | Maize | cytosol | 16.84 | 5.18 |
| Zm00001d016601_P006 | Maize | cytosol | 16.32 | 5.12 |
| Zm00001d051674_P037 | Maize | cytosol | 16.32 | 5.07 |
| Zm00001d043733_P002 | Maize | mitochondrion | 14.21 | 4.92 |
| Zm00001d050131_P002 | Maize | cytosol | 15.79 | 4.69 |
| Zm00001d005995_P003 | Maize | nucleus | 14.21 | 4.51 |
| Zm00001d031316_P020 | Maize | cytosol | 15.26 | 4.5 |
| Zm00001d014589_P001 | Maize | cytosol | 2.11 | 4.12 |
| Zm00001d052840_P016 | Maize | plastid | 14.74 | 3.86 |
| Zm00001d015175_P002 | Maize | plastid | 11.58 | 3.41 |
| Zm00001d035770_P002 | Maize | cytosol, endoplasmic reticulum | 4.21 | 2.69 |
| Zm00001d005778_P001 | Maize | plastid | 3.16 | 2.14 |
| Zm00001d010393_P001 | Maize | plastid | 3.68 | 1.92 |
| Zm00001d035370_P003 | Maize | plastid | 3.68 | 1.72 |
| Zm00001d045670_P001 | Maize | cytosol | 0.53 | 0.53 |
| Zm00001d037983_P001 | Maize | cytosol | 0.53 | 0.42 |
| Zm00001d045718_P001 | Maize | cytosol | 0.53 | 0.4 |
| Zm00001d047488_P001 | Maize | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d051318_P001 | EnsemblPlants:Zm00001d051318_T001 | EnsemblPlantsGene:Zm00001d051318 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF90 | PFAM:PF03765 | ProteinID:AQK54017.1 |
| SMART:SM01100 | SUPFAM:SSF46938 | UniParc:UPI000843DCF3 | UniProt:A0A1D6Q676 | MapMan:35.1 | : |
Description
Sec14p-like phosphatidylinositol transfer family protein
Coordinates
chr4:-:153778712..153782477
Molecular Weight (calculated)
22180.1 Da
IEP (calculated)
9.441
GRAVY (calculated)
-0.331
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNYSILSEV DIKRRQEDDI NRVSTVLSIS KPEACVLLRN YNWSVSKVHD EWFADEERVR KVVGLPEKHI EMTNDRENMH QGYPKETLVR FLKAREWNVA
101: KAHKMIVECL NWRIQNEIDS VLERPIAPVD LYRSICDSQL IGLSGYTKEF SIGKLICRMK IALKRVSQFL ALVLGIAHMT KLRLQLQPKS
101: KAHKMIVECL NWRIQNEIDS VLERPIAPVD LYRSICDSQL IGLSGYTKEF SIGKLICRMK IALKRVSQFL ALVLGIAHMT KLRLQLQPKS
001: MNIHQGYPTE NLLRFLKARD GNVQKAHKML LECLEWRTQN EIDKILTKPI VPVDLYRGIR DTQLVGVSGY SKEGLPVIAI GVGLSTYDKA SVHYYVQSHI
101: QMNEYRDRVV LPSASKKQGR PICTCLKILD MSGLKLSALS QIKLMTAITT IDDLNYPEKT ETYYVVNVPY IFSACWKTIK PLLQERTKKK IQVLKGCGKD
201: ELLKIMDYES LPHFCRREGS GSGRHISNGT VDNCFSLDHS FHQDLYDYVK QQALVKGSGA PIRHGSVHVK FPEPDTEGNK IFDTLENEFQ KLGNDQKI
101: QMNEYRDRVV LPSASKKQGR PICTCLKILD MSGLKLSALS QIKLMTAITT IDDLNYPEKT ETYYVVNVPY IFSACWKTIK PLLQERTKKK IQVLKGCGKD
201: ELLKIMDYES LPHFCRREGS GSGRHISNGT VDNCFSLDHS FHQDLYDYVK QQALVKGSGA PIRHGSVHVK FPEPDTEGNK IFDTLENEFQ KLGNDQKI
Arabidopsis Description
At1g55840/F14J16_2 [Source:UniProtKB/TrEMBL;Acc:Q8W580]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.